RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 TBC1D30Q9Y2I9 924 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 TMX2Q9Y320 296 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 USP15Q9Y4E8 981 aaPredicted RBP5.61□□□□□ -1.51
PRPF39-212ENST00000557477 MBD3L4A6NDZ8 208 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-212ENST00000557477 MBD3L3A6NE82 208 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-212ENST00000557477 POLRMTO00411 1230 aaKnown RBP5.6□□□□□ -1.51
PRPF39-212ENST00000557477 ZNF623O75123 536 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 TCEA3O75764 348 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 ITGB3P05106 788 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 CHRM3P20309 590 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 FGFR2P21802 821 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 MAN2A2P49641 1150 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 TOB1P50616 345 aaPredicted RBP5.6□□□□□ -1.51
PRPF39-212ENST00000557477 RNASE9P60153 205 aaKnown RBP5.6□□□□□ -1.51
PRPF39-212ENST00000557477 DHX8Q14562 1220 aaKnown RBP5.6□□□□□ -1.51
PRPF39-212ENST00000557477 SLC35G1Q2M3R5 365 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 TUBB8Q3ZCM7 444 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 TSHZ1Q6ZSZ6 1077 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 BRI3BPQ8WY22 251 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 IQCDQ96DY2 449 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 FAM89AQ96GI7 184 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 LRIG1Q96JA1 1093 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 ZSWIM1Q9BR11 485 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 STK31Q9BXU1 1019 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 TEX101Q9BY14 249 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 SIK2Q9H0K1 926 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 PPCSQ9HAB8 311 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 MYO1AQ9UBC5 1043 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 JAG2Q9Y219 1238 aa5.6□□□□□ -1.51
PRPF39-212ENST00000557477 GRXCR1A8MXD5 290 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 GOLGA6L6A8MZA4 724 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 MYO1CO00159 1063 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 DCLK1O15075 740 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 ANXA2P07355 339 aaKnown RBP5.59□□□□□ -1.51
PRPF39-212ENST00000557477 FGFR4P22455 802 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 KLRC1P26715 233 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 HIBADHP31937 336 aaKnown RBP5.59□□□□□ -1.51
PRPF39-212ENST00000557477 HSPA7P48741 367 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 CARSP49589 748 aaKnown RBP5.59□□□□□ -1.51
PRPF39-212ENST00000557477 MAPK10P53779 464 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 HSD11B2P80365 405 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 TRIM14Q14142 442 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 MPEG1Q2M385 716 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 ARL13BQ3SXY8 428 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 PDCD4Q53EL6 469 aaKnown RBP5.59□□□□□ -1.51
PRPF39-212ENST00000557477 TAPT1Q6NXT6 567 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 ZDHHC24Q6UX98 284 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 RAPGEF4Q8WZA2 1011 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 TRIB1Q96RU8 372 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 TTYH3Q9C0H2 523 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 REXO4Q9GZR2 422 aaKnown RBP5.59□□□□□ -1.51
PRPF39-212ENST00000557477 MS4A7Q9GZW8 240 aaPredicted RBP5.59□□□□□ -1.51
PRPF39-212ENST00000557477 CHST8Q9H2A9 424 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 AS3MTQ9HBK9 375 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 CD248Q9HCU0 757 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 EIF2B4Q9UI10 523 aaKnown RBP5.59□□□□□ -1.51
PRPF39-212ENST00000557477 ITGB1BP2Q9UKP3 347 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 LRCH1Q9Y2L9 728 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 CHST2Q9Y4C5 530 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 PAXBP1Q9Y5B6 917 aa5.59□□□□□ -1.51
PRPF39-212ENST00000557477 CUX1P39880 1505 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 A0A1B0GTW7 788 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 CYP27B1O15528 508 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 FOSP01100 380 aaPredicted RBP5.58□□□□□ -1.52
PRPF39-212ENST00000557477 MXRA7P84157 204 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 MC2RQ01718 297 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 TNFAIP2Q03169 654 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 OCA2Q04671 838 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 CRHR2Q13324 411 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 RRP1BQ14684 758 aaKnown RBP5.58□□□□□ -1.52
PRPF39-212ENST00000557477 NFIXQ14938 502 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 KRT72Q14CN4 511 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 AMOTQ4VCS5 1084 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 RRAGBQ5VZM2 374 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.58□□□□□ -1.52
PRPF39-212ENST00000557477 SLC30A10Q6XR72 485 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 TTLL10Q6ZVT0 673 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 MYLK4Q86YV6 388 aaPredicted RBP5.58□□□□□ -1.52
PRPF39-212ENST00000557477 PSD4Q8NDX1 1056 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 ZNF483Q8TF39 744 aaPredicted RBP5.58□□□□□ -1.52
PRPF39-212ENST00000557477 SLC46A1Q96NT5 459 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 ADOQ96SZ5 270 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 PNKPQ96T60 521 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 SMOQ99835 787 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 BDH2Q9BUT1 245 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 SELENOOQ9BVL4 669 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 SMOC2Q9H3U7 446 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 RNPEPQ9H4A4 650 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 SERHLQ9NQF3 203 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 CTTNBP2NLQ9P2B4 639 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 ST6GALNAC2Q9UJ37 374 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 MID2Q9UJV3 735 aa5.58□□□□□ -1.52
PRPF39-212ENST00000557477 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.58□□□□□ -1.52
PRPF39-212ENST00000557477 XDHP47989 1333 aa5.57□□□□□ -1.52
PRPF39-212ENST00000557477 A0A087WV62 115 aa5.57□□□□□ -1.52
PRPF39-212ENST00000557477 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.57□□□□□ -1.52
PRPF39-212ENST00000557477 NBNO60934 754 aa5.57□□□□□ -1.52
PRPF39-212ENST00000557477 RASSF9O75901 435 aa5.57□□□□□ -1.52
PRPF39-212ENST00000557477 ELANEP08246 267 aa5.57□□□□□ -1.52
PRPF39-212ENST00000557477 TXNP10599 105 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms