RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 FGF13Q92913 245 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 PBXIP1Q96AQ6 731 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 BORCS6Q96GS4 357 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 MYADMQ96S97 322 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 LRFN3Q9BTN0 628 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 GPR88Q9GZN0 384 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 MFSD1Q9H3U5 465 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 ABI2Q9NYB9 513 aaPredicted RBP14.81□□□□□ -0.04
VPS33B-206ENST00000557358 L1RE1Q9UN81 338 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 PCDHA5Q9Y5H7 936 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 DOCK8Q8NF50 2099 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 MYL4P12829 197 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 VAMP7P51809 220 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 RPL10AP62906 217 aaKnown RBP14.8□□□□□ -0.04
VPS33B-206ENST00000557358 ENPEPQ07075 957 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 ZNF699Q32M78 642 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 ARHGAP15Q53QZ3 475 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 ZNF667Q5HYK9 610 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 INTS6LQ5JSJ4 861 aaKnown RBP14.8□□□□□ -0.04
VPS33B-206ENST00000557358 SPATA2LQ8IUW3 424 aaPredicted RBP14.8□□□□□ -0.04
VPS33B-206ENST00000557358 OR10T2Q8NGX3 314 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 SLITRK6Q9H5Y7 841 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 HCFC1R1Q9NWW0 138 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 NXF1Q9UBU9 619 aaKnown RBP14.8□□□□□ -0.04
VPS33B-206ENST00000557358 CDH9Q9ULB4 789 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 SLC27A5Q9Y2P5 690 aa14.8□□□□□ -0.04
VPS33B-206ENST00000557358 LRRIQ3A6PVS8 624 aaPredicted RBP14.79□□□□□ -0.04
VPS33B-206ENST00000557358 STAU1O95793 577 aaKnown RBP14.79□□□□□ -0.04
VPS33B-206ENST00000557358 GNL1P36915 607 aaPredicted RBP14.79□□□□□ -0.04
VPS33B-206ENST00000557358 FKBP3Q00688 224 aaKnown RBP14.79□□□□□ -0.04
VPS33B-206ENST00000557358 LRRC63Q05C16 580 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 PTPRJQ12913 1337 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 NCOA4Q13772 614 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 SGSM1Q2NKQ1 1148 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 COBLL1Q53SF7 1204 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 OR6B3Q8NGW1 331 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 ITFG1Q8TB96 612 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 TAF4BQ92750 862 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 MKNK1Q9BUB5 465 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 ABCB6Q9NP58 842 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 DUSP12Q9UNI6 340 aa14.79□□□□□ -0.04
VPS33B-206ENST00000557358 TSC2P49815 1807 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 BICDL2A1A5D9 508 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 GOLGA6L22H0YM25 854 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 N4BP1O75113 896 aaKnown RBP14.78□□□□□ -0.04
VPS33B-206ENST00000557358 TACC1O75410 805 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 HAPLN1P10915 354 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-206ENST00000557358 WARSP23381 471 aaKnown RBP14.78□□□□□ -0.04
VPS33B-206ENST00000557358 PIK3CAP42336 1068 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 PRCPP42785 496 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 CASP4P49662 377 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 MYL6P60660 151 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 CLDN10P78369 228 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 SOWAHAQ2M3V2 549 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 BMP8AQ7Z5Y6 402 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 NPAS3Q8IXF0 933 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 SMYD4Q8IYR2 804 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-206ENST00000557358 CXorf38Q8TB03 319 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 FEZF2Q8TBJ5 459 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 ING5Q8WYH8 240 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 PSMG2Q969U7 264 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 MCRS1Q96EZ8 462 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 DHTKD1Q96HY7 919 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-206ENST00000557358 FUBP3Q96I24 572 aaKnown RBP eCLIP14.78□□□□□ -0.04
VPS33B-206ENST00000557358 FAM84AQ96KN4 292 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 SYT15Q9BQS2 421 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 EHD2Q9NZN4 543 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 MAGEC2Q9UBF1 373 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-206ENST00000557358 UXTQ9UBK9 157 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-206ENST00000557358 ZMYM5Q9UJ78 669 aa14.78□□□□□ -0.04
VPS33B-206ENST00000557358 TECTAO75443 2155 aa14.77□□□□□ -0.04
VPS33B-206ENST00000557358 ATP8B3O60423 1300 aa14.77□□□□□ -0.04
VPS33B-206ENST00000557358 STK25O00506 426 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 GABRDO14764 452 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 CST3P01034 146 aaPredicted RBP14.77□□□□□ -0.05
VPS33B-206ENST00000557358 CSH1P0DML2 217 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 CSH2P0DML3 217 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 SRFP11831 508 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 COL9A1P20849 921 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 ACAT1P24752 427 aaKnown RBP14.77□□□□□ -0.05
VPS33B-206ENST00000557358 ANXA13P27216 316 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 CDC25CP30307 473 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 GTF2H1P32780 548 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 PFKPQ01813 784 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 HTR4Q13639 388 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 ZACNQ401N2 412 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 TDRD10Q5VZ19 366 aaKnown RBP14.77□□□□□ -0.05
VPS33B-206ENST00000557358 DNAJB7Q7Z6W7 309 aaPredicted RBP14.77□□□□□ -0.05
VPS33B-206ENST00000557358 SLC44A3Q8N4M1 653 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 SPATA20Q8TB22 786 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 E2F7Q96AV8 911 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 TNIP3Q96KP6 325 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 RTP3Q9BQQ7 232 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 PI4K2AQ9BTU6 479 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 VRTNQ9H8Y1 702 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 ZFP14Q9HCL3 533 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 CEP72Q9P209 647 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 GTF3C4Q9UKN8 822 aa14.77□□□□□ -0.05
VPS33B-206ENST00000557358 NUMBLQ9Y6R0 609 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms