RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ASB3Q9Y575 518 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 KNL1Q8NG31 2342 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 GOLGA8CPA6NN73 597 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 USO1O60763 962 aaKnown RBP13.68□□□□□ -0.22
PSEN1-220ENST00000557037 ALDH1A2O94788 518 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 HOXD12P35452 270 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 AVPR1AP37288 418 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 OSTNP61366 133 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 SRSF1Q07955 248 aaKnown RBP eCLIP13.68□□□□□ -0.22
PSEN1-220ENST00000557037 PDGFRLQ15198 375 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 CRY1Q16526 586 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
PSEN1-220ENST00000557037 CDCA2Q69YH5 1023 aaPredicted RBP13.68□□□□□ -0.22
PSEN1-220ENST00000557037 CENPPQ6IPU0 288 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 TMEM130Q8N3G9 435 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 MAB21L3Q8N8X9 362 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 WHAMMQ8TF30 809 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
PSEN1-220ENST00000557037 HMGB4Q8WW32 186 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 GCNAQ96QF7 691 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 IL21Q9HBE4 155 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 MMP17Q9ULZ9 603 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
PSEN1-220ENST00000557037 HELZP42694 1942 aaKnown RBP13.68□□□□□ -0.22
PSEN1-220ENST00000557037 CEP192Q8TEP8 1941 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 ACKR2O00590 384 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 GJB3O75712 270 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 SLITRK3O94933 977 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 IGHDP01880 384 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 SYPP08247 313 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 ATXN1LP0C7T5 689 aaKnown RBP13.67□□□□□ -0.22
PSEN1-220ENST00000557037 CDC25CP30307 473 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
PSEN1-220ENST00000557037 RPL6Q02878 288 aaKnown RBP13.67□□□□□ -0.22
PSEN1-220ENST00000557037 SLC14A1Q13336 389 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 INF2Q27J81 1249 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 MOXD1Q6UVY6 613 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 PCSK4Q6UW60 755 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 ITIH5Q86UX2 942 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 PGBD3Q8N328 593 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 CEP120Q8N960 986 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 BSNDQ8WZ55 320 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 FAM20AQ96MK3 541 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 PNMA5Q96PV4 448 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 C22orf23Q9BZE7 217 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
PSEN1-220ENST00000557037 RWDD1Q9H446 243 aaPredicted RBP13.67□□□□□ -0.22
PSEN1-220ENST00000557037 KCNMB3Q9NPA1 279 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 SLC38A7Q9NVC3 462 aa13.67□□□□□ -0.22
PSEN1-220ENST00000557037 DOPEY2Q9Y3R5 2298 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 CCDC196A0A1B0GTZ2 297 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 MTMR11A4FU01 709 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 K7EQS6 105 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 NMT1P30419 496 aaKnown RBP13.66□□□□□ -0.22
PSEN1-220ENST00000557037 RPL9P32969 192 aaKnown RBP13.66□□□□□ -0.22
PSEN1-220ENST00000557037 EIF2S3P41091 472 aaKnown RBP13.66□□□□□ -0.22
PSEN1-220ENST00000557037 YARSP54577 528 aaKnown RBP13.66□□□□□ -0.22
PSEN1-220ENST00000557037 YWHAHQ04917 246 aaPredicted RBP13.66□□□□□ -0.22
PSEN1-220ENST00000557037 GPR17Q13304 367 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 CAMK2BQ13554 666 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 SPDYCQ5MJ68 293 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 ALLCQ8N6M5 410 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 HAS1Q92839 578 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 PRDM16Q9HAZ2 1276 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 ANKEF1Q9NU02 776 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 TDP1Q9NUW8 608 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 DUS2Q9NX74 493 aaKnown RBP13.66□□□□□ -0.22
PSEN1-220ENST00000557037 KIAA1522Q9P206 1035 aaPredicted RBP13.66□□□□□ -0.22
PSEN1-220ENST00000557037 PCOLCE2Q9UKZ9 415 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 WNT6Q9Y6F9 365 aa13.66□□□□□ -0.22
PSEN1-220ENST00000557037 AP5Z1O43299 807 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 KLF8O95600 359 aaPredicted RBP13.65□□□□□ -0.22
PSEN1-220ENST00000557037 RARRES1P49788 294 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 ZNF33AQ06730 810 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 TAF12Q16514 161 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 PLEKHG6Q3KR16 790 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 CCDC157Q569K6 752 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 NT5DC1Q5TFE4 455 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 ATF7IP2Q5U623 682 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 ALKAL1Q6UXT8 129 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 LRRC69Q6ZNQ3 347 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 DHX32Q7L7V1 743 aaKnown RBP13.65□□□□□ -0.22
PSEN1-220ENST00000557037 RABEPKQ7Z6M1 372 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 GLRX5Q86SX6 157 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 FAM181AQ8N9Y4 354 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 TXNDC5Q8NBS9 432 aaKnown RBP13.65□□□□□ -0.22
PSEN1-220ENST00000557037 CCDC26Q8TAB7 109 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 GIPC2Q8TF65 315 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 SEPT5Q99719 369 aaPredicted RBP13.65□□□□□ -0.22
PSEN1-220ENST00000557037 ARID3AQ99856 593 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 EIF2AK1Q9BQI3 630 aaKnown RBP13.65□□□□□ -0.22
PSEN1-220ENST00000557037 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
PSEN1-220ENST00000557037 C2orf40Q9H1Z8 148 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms