RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 A6NHS1 94 aa12□□□□□ -0.49
SRP54-213ENST00000556994 PLA2G6O60733 806 aa12□□□□□ -0.49
SRP54-213ENST00000556994 LUC7L3O95232 432 aaKnown RBP12□□□□□ -0.49
SRP54-213ENST00000556994 SPDYE6P0CI01 402 aa12□□□□□ -0.49
SRP54-213ENST00000556994 RASSF2P50749 326 aa12□□□□□ -0.49
SRP54-213ENST00000556994 JAK3P52333 1124 aa12□□□□□ -0.49
SRP54-213ENST00000556994 GDF10P55107 478 aa12□□□□□ -0.49
SRP54-213ENST00000556994 MORF4L2Q15014 288 aa12□□□□□ -0.49
SRP54-213ENST00000556994 CCDC142Q17RM4 750 aa12□□□□□ -0.49
SRP54-213ENST00000556994 CTC1Q2NKJ3 1217 aa12□□□□□ -0.49
SRP54-213ENST00000556994 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
SRP54-213ENST00000556994 SWSAP1Q6NVH7 229 aa12□□□□□ -0.49
SRP54-213ENST00000556994 DSTYKQ6XUX3 929 aa12□□□□□ -0.49
SRP54-213ENST00000556994 C3orf62Q6ZUJ4 267 aa12□□□□□ -0.49
SRP54-213ENST00000556994 APBB1IPQ7Z5R6 666 aaPredicted RBP12□□□□□ -0.49
SRP54-213ENST00000556994 CLNKQ7Z7G1 428 aa12□□□□□ -0.49
SRP54-213ENST00000556994 LRRC6Q86X45 466 aa12□□□□□ -0.49
SRP54-213ENST00000556994 SAMD3Q8N6K7 520 aa12□□□□□ -0.49
SRP54-213ENST00000556994 ASAP3Q8TDY4 903 aa12□□□□□ -0.49
SRP54-213ENST00000556994 PTPRN2Q92932 1015 aa12□□□□□ -0.49
SRP54-213ENST00000556994 PRR11Q96HE9 360 aaPredicted RBP12□□□□□ -0.49
SRP54-213ENST00000556994 HAPLN2Q9GZV7 340 aa12□□□□□ -0.49
SRP54-213ENST00000556994 XPNPEP1Q9NQW7 623 aa12□□□□□ -0.49
SRP54-213ENST00000556994 IP6K2Q9UHH9 426 aa12□□□□□ -0.49
SRP54-213ENST00000556994 RABGEF1Q9UJ41 708 aa12□□□□□ -0.49
SRP54-213ENST00000556994 NUB1Q9Y5A7 615 aa12□□□□□ -0.49
SRP54-213ENST00000556994 SCINQ9Y6U3 715 aa12□□□□□ -0.49
SRP54-213ENST00000556994 MYH9P35579 1960 aaKnown RBP12□□□□□ -0.49
SRP54-213ENST00000556994 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
SRP54-213ENST00000556994 C2orf71A6NGG8 1288 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 EXTL3O43909 919 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 RAD17O75943 681 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 GARTP22102 1010 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 GLRA2P23416 452 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 VCPP55072 806 aaKnown RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 GEMIN4P57678 1058 aaKnown RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 OASLQ15646 514 aaKnown RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 SMTNL2Q2TAL5 461 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 FYB2Q5VWT5 728 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 PHF13Q86YI8 300 aaPredicted RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 MCF2L2Q86YR7 1114 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 PYROXD1Q8WU10 500 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 FAM151AQ8WW52 585 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 ZNF606Q8WXB4 792 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 RBM41Q96IZ5 413 aaKnown RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 CADM1Q9BY67 442 aaKnown RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 DEFB129Q9H1M3 183 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 SENP1Q9P0U3 644 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 ZBTB12Q9Y330 459 aaPredicted RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 PCDHA10Q9Y5I2 948 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 CNTNAP1P78357 1384 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 hCG_1818297A0A087WSY0 165 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 TCRBV7S3A2A0A539 114 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 TMEM191CA6NGB0 347 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 C2CD2LO14523 706 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 PPP1R12AO14974 1030 aaPredicted RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 ATP2A1O14983 1001 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 TMEM191BP0C7N4 346 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 ATP4AP20648 1035 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 MARK3P27448 753 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 SLC18A1P54219 525 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 NRLP54845 237 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 HIF1AQ16665 826 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 SLC45A4Q5BKX6 768 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 KCNT1Q5JUK3 1230 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 SYCP2LQ5T4T6 812 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 ARHGEF16Q5VV41 709 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 DCUN1D2Q6PH85 259 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 CEP128Q6ZU80 1094 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 RHPN2Q8IUC4 686 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 LARGE2Q8N3Y3 721 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 OR5B17Q8NGF7 314 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 ZNF483Q8TF39 744 aaPredicted RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 PAFAH2Q99487 392 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 PDCD2LQ9BRP1 358 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 POLR3FQ9H1D9 316 aaPredicted RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 FBXO6Q9NRD1 293 aaPredicted RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 METTL5Q9NRN9 209 aaKnown RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 ARL8BQ9NVJ2 186 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 HEY2Q9UBP5 337 aa11.99□□□□□ -0.49
SRP54-213ENST00000556994 AGO2Q9UKV8 859 aaKnown RBP11.99□□□□□ -0.49
SRP54-213ENST00000556994 SPDYE5A6NIY4 337 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 MAP3K13O43283 966 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 ATP6V1C1P21283 382 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 SFNP31947 248 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 CTCFP49711 727 aaPredicted RBP11.98□□□□□ -0.49
SRP54-213ENST00000556994 KRT76Q01546 638 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 C1QBPQ07021 282 aaKnown RBP11.98□□□□□ -0.49
SRP54-213ENST00000556994 PSMD6Q15008 389 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 DLGAP5Q15398 846 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 TFDP3Q5H9I0 405 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 EFHC2Q5JST6 749 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 WASHC2DQ5SRD0 308 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 CYP4A22Q5TCH4 519 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 ZNF276Q8N554 614 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 ENDOVQ8N8Q3 282 aaKnown RBP11.98□□□□□ -0.49
SRP54-213ENST00000556994 FBXO36Q8NEA4 188 aa11.98□□□□□ -0.49
SRP54-213ENST00000556994 WDR83Q9BRX9 315 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms