RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ELOVL4Q9GZR5 314 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 HMGXB4Q9UGU5 601 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 PUF60Q9UHX1 559 aaKnown RBP25.27■■□□□ 1.64
SIX4-203ENST00000556952 KIAA1257Q9ULG3 409 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 L1RE1Q9UN81 338 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 PCDHA11Q9Y5I1 949 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 LCHNA4D1U4 455 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 TMEM189-UBE2V1I3L0A0 370 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 CYB561D2O14569 222 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 MED7O43513 233 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 TLL1O43897 1013 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 ARHGEF15O94989 841 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 PTPN14Q15678 1187 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 PPP1R2P3Q6NXS1 205 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 PALB2Q86YC2 1186 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 COLGALT2Q8IYK4 626 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 KBTBD7Q8WVZ9 684 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 SENP8Q96LD8 212 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 TWNKQ96RR1 684 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 PCDHB18PQ96TA0 734 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 NKX2-4Q9H2Z4 354 aa25.26■■□□□ 1.63
SIX4-203ENST00000556952 A0A0U1RQJ8 604 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 RCCD1A6NED2 376 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 KIF2AO00139 706 aaPredicted RBP25.25■■□□□ 1.63
SIX4-203ENST00000556952 B3GAT3O94766 335 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 DDHD2O94830 711 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 TUBB4AP04350 444 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 WARSP23381 471 aaKnown RBP25.25■■□□□ 1.63
SIX4-203ENST00000556952 RAB30Q15771 203 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 ZNF280BQ86YH2 543 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 ADGRF2Q8IZF7 708 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 TMEM86AQ8N2M4 240 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 SPATA18Q8TC71 538 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 ATRIPQ8WXE1 791 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 C16orf45Q96MC5 204 aaPredicted RBP25.25■■□□□ 1.63
SIX4-203ENST00000556952 ISCUQ9H1K1 167 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 PDCL3Q9H2J4 239 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 PCDHGC3Q9UN70 934 aa25.25■■□□□ 1.63
SIX4-203ENST00000556952 ARHGEF37A1IGU5 675 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 RTN2O75298 545 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 CALCAP01258 141 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 CA3P07451 260 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 H2AFZP0C0S5 128 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 VDRP11473 427 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 HTRA4P83105 476 aaPredicted RBP25.24■■□□□ 1.63
SIX4-203ENST00000556952 CLEC16AQ2KHT3 1053 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 DSTYKQ6XUX3 929 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 H2AFVQ71UI9 128 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 PDCL2Q8N4E4 241 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 OR6B3Q8NGW1 331 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 TIFAQ96CG3 184 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 LACRTQ9GZZ8 138 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 SNX25Q9H3E2 840 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 MSRAQ9UJ68 235 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 KIAA1671Q9BY89 1806 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 NLRC5Q86WI3 1866 aa25.24■■□□□ 1.63
SIX4-203ENST00000556952 LSM8O95777 96 aaKnown RBP25.23■■□□□ 1.63
SIX4-203ENST00000556952 CYP1A1P04798 512 aaPredicted RBP25.23■■□□□ 1.63
SIX4-203ENST00000556952 ODC1P11926 461 aa25.23■■□□□ 1.63
SIX4-203ENST00000556952 CD19P15391 556 aa25.23■■□□□ 1.63
SIX4-203ENST00000556952 BRD2P25440 801 aaKnown RBP25.23■■□□□ 1.63
SIX4-203ENST00000556952 GATMP50440 423 aa25.23■■□□□ 1.63
SIX4-203ENST00000556952 LRRC43Q8N309 656 aa25.23■■□□□ 1.63
SIX4-203ENST00000556952 RAD9AQ99638 391 aa25.23■■□□□ 1.63
SIX4-203ENST00000556952 RC3H2Q9HBD1 1191 aaKnown RBP25.23■■□□□ 1.63
SIX4-203ENST00000556952 BTNL10A8MVZ5 291 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 A8MXQ7 604 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 B4GALT3O60512 393 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 UNGP13051 313 aaPredicted RBP25.22■■□□□ 1.63
SIX4-203ENST00000556952 STILQ15468 1287 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 SPRED2Q7Z698 418 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 PACSIN1Q9BY11 444 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TAS2R14Q9NYV8 317 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 MYO1AQ9UBC5 1043 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 STXBP5LQ9Y2K9 1186 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 ANKRD62A6NC57 917 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TBKBP1A7MCY6 615 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TMCO5BA8MYB1 307 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 M0QZQ0 153 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 KIF5CO60282 957 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 KIF4AO95239 1232 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TMEM253P0C7T8 217 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 GNL1P36915 607 aaPredicted RBP25.22■■□□□ 1.63
SIX4-203ENST00000556952 CENPCQ03188 943 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TIGD5Q53EQ6 642 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 SGO2Q562F6 1265 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 CD300LGQ6UXG3 332 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TFAP2BQ92481 460 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 RABGGTAQ92696 567 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 YME1L1Q96TA2 773 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 ZSWIM1Q9BR11 485 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TMEM175Q9BSA9 504 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TTYH1Q9H313 450 aaPredicted RBP25.22■■□□□ 1.63
SIX4-203ENST00000556952 RRAGDQ9NQL2 400 aaPredicted RBP25.22■■□□□ 1.63
SIX4-203ENST00000556952 DSEQ9UL01 958 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 TFR2Q9UP52 801 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 INSL6Q9Y581 213 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 CEP83Q9Y592 693 aa25.22■■□□□ 1.63
SIX4-203ENST00000556952 GABRDO14764 452 aa25.21■■□□□ 1.63
SIX4-203ENST00000556952 DGKIO75912 1065 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms