RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CDC25CP30307 473 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 NMT1P30419 496 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 TUFMP49411 452 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 TOB1P50616 345 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 RUNX3Q13761 415 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 VEPH1Q14D04 833 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 PTPAQ15257 358 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 ENOX2Q16206 610 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 TAF12Q16514 161 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 IL17AQ16552 155 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 PLK5Q496M5 336 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 SLC39A12Q504Y0 691 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 CMTM8Q8IZV2 173 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 FBXO18Q8NFZ0 1043 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 BICD1Q96G01 975 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 ZC3H10Q96K80 434 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 MMTAG2Q9BU76 263 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 TIPINQ9BVW5 301 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 FBRSL1Q9HCM7 1045 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 VPS45Q9NRW7 570 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 HSFX1Q9UBD0 423 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 KCNG1Q9UIX4 513 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 PCDHB6Q9Y5E3 794 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 LAMA1P25391 3075 aa9.79□□□□□ -0.84
HNRNPC-227ENST00000556897 EML5Q05BV3 1969 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 NPHP3-ACAD11A0A0J9YXS1 232 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 DCLK1O15075 740 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 FAM189A1O60320 539 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 NFICP08651 508 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 ARSAP15289 507 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 U2AF2P26368 475 aaKnown RBP eCLIP9.78□□□□□ -0.842e-7■■■□□ 18.4
HNRNPC-227ENST00000556897 AVPR1AP37288 418 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 LIG4P49917 911 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 NOVA1P51513 510 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 CREB5Q02930 508 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 BFSP1Q12934 665 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 SPATA1Q5VX52 437 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 C9orf57Q5W0N0 161 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 NAIF1Q69YI7 327 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 TMEM150AQ86TG1 271 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 CCDC83Q8IWF9 413 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 CAMKK1Q8N5S9 505 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 MAB21L3Q8N8X9 362 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 RIN3Q8TB24 985 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 GIPC2Q8TF65 315 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 USP13Q92995 863 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 PLIN2Q99541 437 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 EDEM2Q9BV94 578 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 ZCWPW1Q9H0M4 648 aa9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 DUSP15Q9H1R2 295 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 RPF1Q9H9Y2 349 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 FASNP49327 2511 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-227ENST00000556897 ABCA7Q8IZY2 2146 aa9.77□□□□□ -0.84
HNRNPC-227ENST00000556897 MYH11P35749 1972 aa9.77□□□□□ -0.84
HNRNPC-227ENST00000556897 C4orf47A7E2U8 309 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 PIRO00625 290 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 GIPC1O14908 333 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 HNRNPDLO14979 420 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 CAVIN2O95810 425 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 GALK1P51570 392 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 NLRP12P59046 1061 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 AMPD2Q01433 879 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 ELF2Q15723 593 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 KYAT1Q16773 422 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 TXNDC8Q6A555 127 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 JADE1Q6IE81 842 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 CC2D1AQ6P1N0 951 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 UNQ6494/PRO21346Q6UXR6 183 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 DTHD1Q6ZMT9 781 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 LRRTM3Q86VH5 581 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 SYT2Q8N9I0 419 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 RPLP0P6Q8NHW5 317 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 PNMA5Q96PV4 448 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 TSPAN18Q96SJ8 248 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 P2RY13Q9BPV8 354 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 LLPHQ9BRT6 129 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 SH2B1Q9NRF2 756 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 TDP1Q9NUW8 608 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 ABI2Q9NYB9 513 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 ZMYM5Q9UJ78 669 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 ZMIZ1Q9ULJ6 1067 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 SPEGQ15772 3267 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 WDFY3Q8IZQ1 3526 aa9.77□□□□□ -0.85
HNRNPC-227ENST00000556897 ANK1P16157 1881 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 ZZEF1O43149 2961 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 LNP1A1A4G5 178 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 ANO9A1A5B4 782 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 BCLAF3A2AJT9 711 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 H0YCG3 227 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 LAD1O00515 517 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 CYB561D2O14569 222 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 OGTO15294 1046 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 RHOBTB1O94844 696 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 APBB3O95704 486 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 F11P03951 625 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 CYP11A1P05108 521 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 ADRB2P07550 413 aa9.76□□□□□ -0.85
HNRNPC-227ENST00000556897 HAPLN1P10915 354 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms