RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TRIML1Q8N9V2 468 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 GBP4Q96PP9 640 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 KIAA1468Q9P260 1216 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 TRIM49BA6NDI0 452 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 BIN1O00499 593 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 SLC16A3O15427 465 aaKnown RBP24.5■■□□□ 1.51
TDP1-216ENST00000556867 RHOP08100 348 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 EPB41P11171 864 aaKnown RBP24.5■■□□□ 1.51
TDP1-216ENST00000556867 PTPN2P17706 415 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 TNNC1P63316 161 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 ZNF699Q32M78 642 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 WDR72Q3MJ13 1102 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 FOXR2Q6PJQ5 311 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 ELMOD1Q8N336 334 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 SPPL2BQ8TCT7 592 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 EEF2KMTQ96G04 330 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 MMS19Q96T76 1030 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 PKMYT1Q99640 499 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 CEP72Q9P209 647 aa24.5■■□□□ 1.51
TDP1-216ENST00000556867 ZFP37Q9Y6Q3 630 aaPredicted RBP24.5■■□□□ 1.51
TDP1-216ENST00000556867 PPP1R3GB7ZBB8 358 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 TACC1O75410 805 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 TRIM49P0CI25 452 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 TRIM49CP0CI26 452 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 ACAT1P24752 427 aaKnown RBP24.49■■□□□ 1.51
TDP1-216ENST00000556867 CAMK4Q16566 473 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 NFE2Q16621 373 aaPredicted RBP24.49■■□□□ 1.51
TDP1-216ENST00000556867 CLSTN2Q9H4D0 955 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 LMBRD1Q9NUN5 540 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 TMLHEQ9NVH6 421 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 LIMD1Q9UGP4 676 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 SLC27A5Q9Y2P5 690 aa24.49■■□□□ 1.51
TDP1-216ENST00000556867 TRIOO75962 3097 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 GTF2H1P32780 548 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 ALDH1A3P47895 512 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 TUFMP49411 452 aaKnown RBP24.48■■□□□ 1.51
TDP1-216ENST00000556867 PPP3CAQ08209 521 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 IQCEQ6IPM2 695 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 ITFG1Q8TB96 612 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 TAF4BQ92750 862 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 ZNF512Q96ME7 567 aaPredicted RBP24.48■■□□□ 1.51
TDP1-216ENST00000556867 CORO1BQ9BR76 489 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 C1QTNF1Q9BXJ1 281 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 DNAJC25Q9H1X3 360 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 ABI2Q9NYB9 513 aaPredicted RBP24.48■■□□□ 1.51
TDP1-216ENST00000556867 CDH7Q9ULB5 785 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 PCDHB5Q9Y5E4 795 aa24.48■■□□□ 1.51
TDP1-216ENST00000556867 HCRTO43612 131 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 LAMP2P13473 410 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 GCLMP48507 274 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 EPHB3P54753 998 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 EPHA5P54756 1037 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 SLC5A9Q2M3M2 681 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 SGSM1Q2NKQ1 1148 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 ZNF667Q5HYK9 610 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 KLHL10Q6JEL2 608 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 TTI2Q6NXR4 508 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 LEMD2Q8NC56 503 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 NELFBQ8WX92 580 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 FGF13Q92913 245 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 SYT15Q9BQS2 421 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 MRPL45Q9BRJ2 306 aaKnown RBP24.47■■□□□ 1.51
TDP1-216ENST00000556867 TMEM8AQ9HCN3 771 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 ABCB6Q9NP58 842 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 NXF1Q9UBU9 619 aaKnown RBP24.47■■□□□ 1.51
TDP1-216ENST00000556867 CDH9Q9ULB4 789 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 SORCS3Q9UPU3 1222 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 MRPS23Q9Y3D9 190 aaKnown RBP24.47■■□□□ 1.51
TDP1-216ENST00000556867 ASB3Q9Y575 518 aa24.47■■□□□ 1.51
TDP1-216ENST00000556867 TECTAO75443 2155 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 BICDL2A1A5D9 508 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 ASS1P00966 412 aaKnown RBP24.46■■□□□ 1.51
TDP1-216ENST00000556867 HLA-DRAP01903 254 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 ASGR2P07307 311 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 HAPLN1P10915 354 aaPredicted RBP24.46■■□□□ 1.51
TDP1-216ENST00000556867 LMO2P25791 158 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 PIK3CAP42336 1068 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 ZXDAP98168 799 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 MGAT5BQ3V5L5 792 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 PRSS36Q5K4E3 855 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 FAM171BQ6P995 826 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 NPAS3Q8IXF0 933 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 EDAQ92838 391 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 CEP63Q96MT8 703 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 SEPT5Q99719 369 aaPredicted RBP24.46■■□□□ 1.51
TDP1-216ENST00000556867 ASAH2Q9NR71 780 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 IGSF9Q9P2J2 1179 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 GTF3C4Q9UKN8 822 aa24.46■■□□□ 1.51
TDP1-216ENST00000556867 ZNF197O14709 1029 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 STX10O60499 249 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 SOAT2O75908 522 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 MICAL2O94851 1124 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 ATF6P18850 670 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 CYP4A22Q5TCH4 519 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 PDZD4Q76G19 769 aaPredicted RBP24.45■■□□□ 1.5
TDP1-216ENST00000556867 DUSP9Q99956 384 aaKnown RBP24.45■■□□□ 1.5
TDP1-216ENST00000556867 SNX25Q9H3E2 840 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 SMYD3Q9H7B4 428 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 CTNND2Q9UQB3 1225 aa24.45■■□□□ 1.5
TDP1-216ENST00000556867 NME7Q9Y5B8 376 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms