RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PMS1P54277 932 aaKnown RBP11.13□□□□□ -0.63
SNX6-208ENST00000556712 TRPC3Q13507 836 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 MGAT5BQ3V5L5 792 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 PRSS36Q5K4E3 855 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 ZNF658Q5TYW1 1059 aaPredicted RBP11.13□□□□□ -0.63
SNX6-208ENST00000556712 PARM1Q6UWI2 310 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 SCARA5Q6ZMJ2 495 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 PDZD4Q76G19 769 aaPredicted RBP11.13□□□□□ -0.63
SNX6-208ENST00000556712 TMC8Q8IU68 726 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 TMEM86AQ8N2M4 240 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 ELMOD1Q8N336 334 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 GPR152Q8TDT2 470 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 FGF14Q92915 247 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 MCRS1Q96EZ8 462 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 ASIC4Q96FT7 647 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 TIGD1Q96MW7 591 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 MMS19Q96T76 1030 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 KXD1Q9BQD3 176 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 MRPL45Q9BRJ2 306 aaKnown RBP11.13□□□□□ -0.63
SNX6-208ENST00000556712 RPP25Q9BUL9 199 aaKnown RBP11.13□□□□□ -0.63
SNX6-208ENST00000556712 SMYD3Q9H7B4 428 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 MMRN2Q9H8L6 949 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 ZNF334Q9HCZ1 680 aaPredicted RBP11.13□□□□□ -0.63
SNX6-208ENST00000556712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.13□□□□□ -0.632e-9■■■■■ 223.6
SNX6-208ENST00000556712 ASAH2Q9NR71 780 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 RMND1Q9NWS8 449 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNX6-208ENST00000556712 NXF1Q9UBU9 619 aaKnown RBP11.13□□□□□ -0.63
SNX6-208ENST00000556712 MAN1B1Q9UKM7 699 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 FRMD4BQ9Y2L6 1034 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 NME7Q9Y5B8 376 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
SNX6-208ENST00000556712 DENND4CQ5VZ89 1909 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 BIN1O00499 593 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 PHACTR2O75167 634 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 ATP2C2O75185 946 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 MOSPD3O75425 235 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 C4BPAP04003 597 aaKnown RBP11.12□□□□□ -0.63
SNX6-208ENST00000556712 CD44P16070 742 aaKnown RBP11.12□□□□□ -0.63
SNX6-208ENST00000556712 LMO2P25791 158 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 EPHB3P54753 998 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 TNNC1P63316 161 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 MYL7Q01449 175 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 TSPY1Q01534 308 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 PLD1Q13393 1074 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 TDGQ13569 410 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 TEAD2Q15562 447 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 NFIL3Q16649 462 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 ZNF699Q32M78 642 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 INTS6LQ5JSJ4 861 aaKnown RBP11.12□□□□□ -0.63
SNX6-208ENST00000556712 SDHAF4Q5VUM1 108 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 IQCEQ6IPM2 695 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 FAM186BQ8IYM0 893 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 DCP1BQ8IZD4 617 aaKnown RBP11.12□□□□□ -0.63
SNX6-208ENST00000556712 SPATA20Q8TB22 786 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 GIPC2Q8TF65 315 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 TMEM174Q8WUU8 243 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 ZNF512Q96ME7 567 aaPredicted RBP11.12□□□□□ -0.63
SNX6-208ENST00000556712 GSDMAQ96QA5 445 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 PKMYT1Q99640 499 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 SYT15Q9BQS2 421 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 PI4K2AQ9BTU6 479 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 LRRC3Q9BY71 257 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 XYLT2Q9H1B5 865 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 GTF3C4Q9UKN8 822 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 MAFFQ9ULX9 164 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 DUSP12Q9UNI6 340 aa11.12□□□□□ -0.63
SNX6-208ENST00000556712 A0A1W2PRU2 124 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 MYBPHLA2RUH7 354 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 ANHXE9PGG2 379 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 GABRDO14764 452 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 CFHP08603 1231 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 PDGFRBP09619 1106 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 HAPLN1P10915 354 aaPredicted RBP11.11□□□□□ -0.63
SNX6-208ENST00000556712 ALDH1A3P47895 512 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 GCLMP48507 274 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 VAMP7P51809 220 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 CLDN10P78369 228 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 PPP3CAQ08209 521 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 ADAM9Q13443 819 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 NCOA4Q13772 614 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 EDRF1Q3B7T1 1238 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 WDR72Q3MJ13 1102 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 ZACNQ401N2 412 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 STXBP5Q5T5C0 1151 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 CYP4A22Q5TCH4 519 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 SPOPLQ6IQ16 392 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 UBALD2Q8IYN6 164 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 SHKBP1Q8TBC3 707 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 SPPL2BQ8TCT7 592 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 TMC2Q8TDI7 906 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 PSMG2Q969U7 264 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 MYLPFQ96A32 169 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 PBXIP1Q96AQ6 731 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 ACBD6Q9BR61 282 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 SDCBP2Q9H190 292 aa11.11□□□□□ -0.63
SNX6-208ENST00000556712 DPEP3Q9H4B8 488 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms