RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 PCDHB4Q9Y5E5 795 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 FHOD1Q9Y613 1164 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 IRAK3Q9Y616 596 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 MTCH2Q9Y6C9 303 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 EPHB6O15197 1021 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 AP5Z1O43299 807 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 ATP2C2O75185 946 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 UCHL3P15374 230 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 TRIM21P19474 475 aaKnown RBP14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 POLR2FP61218 127 aaKnown RBP14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 SLC39A12Q504Y0 691 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 TCEAL5Q5H9L2 206 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 TMEM270Q6UE05 265 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 ACOT1Q86TX2 421 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 SPATA18Q8TC71 538 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 FAXDC2Q96IV6 333 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 PGLYRP2Q96PD5 576 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 NLRC4Q9NPP4 1024 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 PLCB1Q9NQ66 1216 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 FNIP2Q9P278 1114 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 CHD7Q9P2D1 2997 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 BARX2Q9UMQ3 279 aaPredicted RBP14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 NME7Q9Y5B8 376 aa14.99□□□□□ -0.01
VIPAS39-208ENST00000556412 PDCD11Q14690 1871 aaKnown RBP14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 CILPO75339 1184 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 FAM163BP0C2L3 166 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 FOSL2P15408 326 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 ROR1Q01973 937 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 INCA1Q0VD86 236 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 CCDC142Q17RM4 750 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 SLC8B1Q6J4K2 584 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 LLGL2Q6P1M3 1020 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 ENOSF1Q7L5Y1 443 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 GPR65Q8IYL9 337 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 FAM81BQ96LP2 452 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 GUCD1Q96NT3 240 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 TWNKQ96RR1 684 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 LPIN3Q9BQK8 851 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 ACBD6Q9BR61 282 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 NT5C1AQ9BXI3 368 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 OXCT2Q9BYC2 517 aaPredicted RBP14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 GTF3C4Q9UKN8 822 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 CDH9Q9ULB4 789 aa14.98□□□□□ -0.01
VIPAS39-208ENST00000556412 A0A1W2PQC6 194 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 GOLGA6L3A6NEY3 463 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 TBC1D4O60343 1298 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 SPATA31D3P0C874 917 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 GTF2F1P35269 517 aaKnown RBP eCLIP14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 UVSSAQ2YD98 709 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 MDH1BQ5I0G3 518 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 INTS6LQ5JSJ4 861 aaKnown RBP14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 SARM1Q6SZW1 724 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 SPATA31D4Q6ZUB0 917 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 CACNA2D4Q7Z3S7 1137 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 UNC93AQ86WB7 457 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 GPIHBP1Q8IV16 184 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 DCP1BQ8IZD4 617 aaKnown RBP14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 TTC39CQ8N584 583 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 TNIP3Q96KP6 325 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 SPAG5Q96R06 1193 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 ELOVL4Q9GZR5 314 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 ZCWPW1Q9H0M4 648 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 GANQ9H2C0 597 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 LMCD1Q9NZU5 365 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 TRIP11Q15643 1979 aa14.97□□□□□ -0.01
VIPAS39-208ENST00000556412 MYBPHLA2RUH7 354 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 CLASP2O75122 1294 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 NOL4O94818 638 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 GLUD1P00367 558 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 PNMA6AP0CW24 399 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 PTPN1P18031 435 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 ACO1P21399 889 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 CYP27A1Q02318 531 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 DPY19L2P1Q6NXN4 242 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 RNF19BQ6ZMZ0 732 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 EP400NLQ6ZTU2 488 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 LRRTM3Q86VH5 581 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 RBBP8NLQ8NC74 664 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 B3GALNT2Q8NCR0 500 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 PPM1EQ8WY54 764 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 HEXIM2Q96MH2 286 aaKnown RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 DNAI2Q9GZS0 605 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 FAM49BQ9NUQ9 324 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 MTMR10Q9NXD2 777 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 WDR27A2RRH5 827 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 TGM5O43548 720 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 CD19P15391 556 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 RFX1P22670 979 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 RAB33AQ14088 237 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 DRAP1Q14919 205 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 CCDC85BQ15834 202 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 WHAMMQ8TF30 809 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 TMEM176AQ96HP8 235 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 CRTAC1Q9NQ79 661 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 TMLHEQ9NVH6 421 aa14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 ABI2Q9NYB9 513 aaPredicted RBP14.96□□□□□ -0.01
VIPAS39-208ENST00000556412 COL4A4P53420 1690 aaPredicted RBP14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 EPCAMP16422 314 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 CLCN4P51793 760 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms