RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SPOCD1Q6ZMY3 1216 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 TARS2Q9BW92 718 aaKnown RBP15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 C2orf40Q9H1Z8 148 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 RPAP3Q9H6T3 665 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 TISP43B9A030 160 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 XPOTO43592 962 aaKnown RBP15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 ZCCHC18P0CG32 403 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 PECAM1P16284 738 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 EFNA5P52803 228 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 OTUD4Q01804 1114 aaKnown RBP15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 CYP24A1Q07973 514 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 PPP3CAQ08209 521 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 ARSHQ5FYA8 562 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 KCNT1Q5JUK3 1230 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 MROH9Q5TGP6 573 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 C1orf186Q6ZWK4 172 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 RNF149Q8NC42 400 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 DNALI1O14645 258 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 LRRC57Q8N9N7 239 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 IPO11Q9UI26 975 aaKnown RBP15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 UNC5CO95185 931 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 MCL1Q07820 350 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 LACTB2Q53H82 288 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 SDCCAG3Q96C92 435 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 TAAR1Q96RJ0 339 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 NIF3L1Q9GZT8 377 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 C17orf75Q9HAS0 396 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 GTSE1Q9NYZ3 720 aa15.73■□□□□ 0.11
ARHGEF40-207ENST00000556399 POLRMTO00411 1230 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 LRRC6Q86X45 466 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 LOC100653049A0A140TA62 436 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 WDR46O15213 610 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 KRT34O76011 436 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 PRKCBP05771 671 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 HSPA8P11142 646 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 TNFAIP2Q03169 654 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 FAM163AQ96GL9 167 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 PPP1R36Q96LQ0 422 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 PAPOLBQ9NRJ5 636 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 SPATA31A5Q5VU36 1347 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 SPATA31A7Q8IWB4 1347 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 TM9SF1O15321 606 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 ATP9AO75110 1047 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 ZFXP17010 805 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 BGNP21810 368 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 RHBDL3P58872 404 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 OCRLQ01968 901 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 RASA2Q15283 850 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 SNX30Q5VWJ9 437 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 RAB44Q7Z6P3 723 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 CLMNQ96JQ2 1002 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 METTL5Q9NRN9 209 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 BFARQ9NZS9 450 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 RGPD1P0DJD0 1748 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 CHKAP35790 457 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 ZCWPW2Q504Y3 356 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 HYIQ5T013 277 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 SCUBE1Q8IWY4 988 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 LRRC43Q8N309 656 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 DTNBP1Q96EV8 351 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 KCNK16Q96T55 309 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 RNPEPL1Q9HAU8 725 aa15.72■□□□□ 0.11
ARHGEF40-207ENST00000556399 CYP3A7-CYP3A51PA0A087WV96 503 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 DDX3YO15523 660 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 GRAP2O75791 330 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 CYP3A7P24462 503 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 NCALDP61601 193 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 PHEXP78562 749 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 GRM1Q13255 1194 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 ASTE1Q2TB18 679 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 TCP10LQ8TDR4 215 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 CMTM5Q96DZ9 223 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 CCDC68Q9H2F9 335 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 TSPYL2Q9H2G4 693 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 ACAD9Q9H845 621 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 FER1L4A9Z1Z3 1794 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 RGPD8O14715 1765 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 EEF1B2P24534 225 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 RPS6P62753 249 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 FAXCQ5TGI0 409 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 ZNF75CPQ92670 426 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 SHCBP1LQ9BZQ2 653 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 GRID1Q9ULK0 1009 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 SHOC2Q9UQ13 582 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 INPP5FQ9Y2H2 1132 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 E7ENQ6 273 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 MEIS2O14770 477 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 ADCY3O60266 1144 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 KRT16P08779 473 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 MAPTP10636 758 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 VCAM1P19320 739 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 CASP2P42575 452 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 RARRES1P49788 294 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 PAPOLAP51003 745 aaKnown RBP15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 SEZ6Q53EL9 994 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 RNF43Q68DV7 783 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 ZDHHC15Q96MV8 337 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 BTBD10Q9BSF8 475 aa15.71■□□□□ 0.11
ARHGEF40-207ENST00000556399 QTRT2Q9H974 415 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms