RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 UBXN1Q04323 297 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 GPR17Q13304 367 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 ADAM15Q13444 863 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 TPGS2Q68CL5 300 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 LILRA6Q6PI73 481 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 ELMSAN1Q6PJG2 1045 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 SLC22A17Q8WUG5 538 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 TMEM209Q96SK2 561 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 ZCWPW1Q9H0M4 648 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 FAM124BQ9H5Z6 455 aaPredicted RBP15.12■□□□□ 0.01
SNX6-206ENST00000556162 CDH9Q9ULB4 789 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 BARX2Q9UMQ3 279 aaPredicted RBP15.12■□□□□ 0.01
SNX6-206ENST00000556162 WDR27A2RRH5 827 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 ABLIM3O94929 683 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 SPATA31D3P0C874 917 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 EPCAMP16422 314 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 CD58P19256 250 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 ELF1P32519 619 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 YWHAEP62258 255 aaKnown RBP15.11■□□□□ 0.01
SNX6-206ENST00000556162 SLC39A12Q504Y0 691 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 PHLDB3Q6NSJ2 640 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 EP400NLQ6ZTU2 488 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 SPATA31D4Q6ZUB0 917 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 RRAGAQ7L523 313 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 UNC93AQ86WB7 457 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 MAFAQ8NHW3 353 aaPredicted RBP15.11■□□□□ 0.01
SNX6-206ENST00000556162 CASP10Q92851 521 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 PABPC5Q96DU9 382 aaKnown RBP15.11■□□□□ 0.01
SNX6-206ENST00000556162 FAM81BQ96LP2 452 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 DNAI2Q9GZS0 605 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 PLEKHA4Q9H4M7 779 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 UBE2TQ9NPD8 197 aaPredicted RBP15.11■□□□□ 0.01
SNX6-206ENST00000556162 CISHQ9NSE2 258 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 CLDND1Q9NY35 253 aa15.11■□□□□ 0.01
SNX6-206ENST00000556162 HCRTO43612 131 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 ATF2P15336 505 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 TRIM21P19474 475 aaKnown RBP15.1■□□□□ 0.01
SNX6-206ENST00000556162 NDST1P52848 882 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 GCNT1Q02742 428 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 INCA1Q0VD86 236 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 KCNMA1Q12791 1236 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 SMARCB1Q12824 385 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 KCNC3Q14003 757 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 CTC1Q2NKJ3 1217 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 INTS6LQ5JSJ4 861 aaKnown RBP15.1■□□□□ 0.01
SNX6-206ENST00000556162 TMEM184AQ6ZMB5 413 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 KREMEN2Q8NCW0 462 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 TNIP3Q96KP6 325 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 ARID3AQ99856 593 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 SYT15Q9BQS2 421 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 APEX2Q9UBZ4 518 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 AFF4Q9UHB7 1163 aaKnown RBP15.1■□□□□ 0.01
SNX6-206ENST00000556162 GTF3C4Q9UKN8 822 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 SPDYE4A6NLX3 237 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 LINC01565O15544 149 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 RBM10P98175 930 aaKnown RBP15.1■□□□□ 0.01
SNX6-206ENST00000556162 FANCCQ00597 558 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 ADCY1Q08828 1119 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 MAPRE1Q15691 268 aaKnown RBP15.1■□□□□ 0.01
SNX6-206ENST00000556162 NFE2Q16621 373 aaPredicted RBP15.1■□□□□ 0.01
SNX6-206ENST00000556162 RNF19BQ6ZMZ0 732 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 LRRTM3Q86VH5 581 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 ARHGEF19Q8IW93 802 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 VN1R2Q8NFZ6 395 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 HDAC7Q8WUI4 952 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 PCMTD1Q96MG8 357 aaPredicted RBP15.1■□□□□ 0.01
SNX6-206ENST00000556162 PGLYRP2Q96PD5 576 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 NT5C1AQ9BXI3 368 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
SNX6-206ENST00000556162 MAN1C1Q9NR34 630 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 MAFFQ9ULX9 164 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 NME7Q9Y5B8 376 aa15.1■□□□□ 0.01
SNX6-206ENST00000556162 SPTBN5Q9NRC6 3674 aaKnown RBP15.09■□□□□ 0.01
SNX6-206ENST00000556162 ATG2AQ2TAZ0 1938 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 MYBPHLA2RUH7 354 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 ATP2C2O75185 946 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 CILPO75339 1184 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 PTPN1P18031 435 aaKnown RBP15.09■□□□□ 0.01
SNX6-206ENST00000556162 MFAP3P55082 362 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 PSMC1P62191 440 aaKnown RBP15.09■□□□□ 0.01
SNX6-206ENST00000556162 COL19A1Q14993 1142 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 LIN9Q5TKA1 542 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 FAM171BQ6P995 826 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 ENOSF1Q7L5Y1 443 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 B3GALNT2Q8NCR0 500 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 C2orf15Q8WU43 125 aaKnown RBP15.09■□□□□ 0.01
SNX6-206ENST00000556162 JAKMIP2Q96AA8 810 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 CYP4F11Q9HBI6 524 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 DZANK1Q9NVP4 752 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 FBXW11Q9UKB1 542 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 XIRP2A4UGR9 3374 aa15.09■□□□□ 0.01
SNX6-206ENST00000556162 PRUNE2Q8WUY3 3088 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 A0A1B0GTH6 734 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 PRRG1O14668 218 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 GLP2RO95838 553 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 UBASH3AP57075 661 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 APBA1Q02410 837 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 SYCP1Q15431 976 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 UVSSAQ2YD98 709 aa15.08■□□□□ 0.01
SNX6-206ENST00000556162 ZNF394Q53GI3 561 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms