RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ACCSQ96QU6 501 aa20.31■□□□□ 0.84
CDKN3-209ENST00000556102 TASP1Q9H6P5 420 aa20.31■□□□□ 0.84
CDKN3-209ENST00000556102 IL21Q9HBE4 155 aa20.31■□□□□ 0.84
CDKN3-209ENST00000556102 ZNF638Q14966 1978 aaKnown RBP20.3■□□□□ 0.84
CDKN3-209ENST00000556102 MYBPHLA2RUH7 354 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 HAPLN1P10915 354 aaPredicted RBP20.3■□□□□ 0.84
CDKN3-209ENST00000556102 PNPLA4P41247 253 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 SOX9P48436 509 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 KCNA1Q09470 495 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 TAF12Q16514 161 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 DGLUCYQ7Z3D6 616 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 LRRTM3Q86VH5 581 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 RALGPS2Q86X27 583 aaPredicted RBP20.3■□□□□ 0.84
CDKN3-209ENST00000556102 BRSK2Q8IWQ3 736 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 DCP1BQ8IZD4 617 aaKnown RBP20.3■□□□□ 0.84
CDKN3-209ENST00000556102 FAM213AQ9BRX8 229 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 OLFML3Q9NRN5 406 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
CDKN3-209ENST00000556102 DLL3Q9NYJ7 618 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 TBC1D7Q9P0N9 293 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 ZMYM5Q9UJ78 669 aa20.3■□□□□ 0.84
CDKN3-209ENST00000556102 OBSL1O75147 1896 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 SPECC1L-ADORA2AF8WAN1 911 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 GCNT3O95395 438 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 PRAMEF12O95522 483 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 SYT1P21579 422 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 CTHP32929 405 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 CXCL12P48061 93 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 CDR1P51861 262 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 PLCB2Q00722 1185 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 SATB1Q01826 763 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 GAS6Q14393 721 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 FAM173BQ6P4H8 233 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 CCDC73Q6ZRK6 1079 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 SPEM1Q8N4L4 309 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 BPIFB1Q8TDL5 484 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 GIPC2Q8TF65 315 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 ZFYVE19Q96K21 471 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 PCDHB13Q9Y5F0 798 aa20.29■□□□□ 0.84
CDKN3-209ENST00000556102 MORC2Q9Y6X9 1032 aaPredicted RBP20.29■□□□□ 0.84
CDKN3-209ENST00000556102 DNAH14Q0VDD8 3507 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 LDHAP00338 332 aaKnown RBP20.28■□□□□ 0.84
CDKN3-209ENST00000556102 GARTP22102 1010 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 WNT7BP56706 349 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 TFAMQ00059 246 aaKnown RBP20.28■□□□□ 0.84
CDKN3-209ENST00000556102 TSPY1Q01534 308 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 CEBPZQ03701 1054 aaKnown RBP20.28■□□□□ 0.84
CDKN3-209ENST00000556102 ALCAMQ13740 583 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 DGKKQ5KSL6 1271 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 TXNDC11Q6PKC3 985 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 ZSWIM2Q8NEG5 633 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 SAAL1Q96ER3 474 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 GTSE1Q9NYZ3 720 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 PCDHB5Q9Y5E4 795 aa20.28■□□□□ 0.84
CDKN3-209ENST00000556102 FRMD3A2A2Y4 597 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 IDEP14735 1019 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 POLR2BP30876 1174 aaKnown RBP20.27■□□□□ 0.84
CDKN3-209ENST00000556102 STAT6P42226 847 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 CASP5P51878 434 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 RSPO4Q2I0M5 234 aaPredicted RBP20.27■□□□□ 0.84
CDKN3-209ENST00000556102 WDR44Q5JSH3 913 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 SYCP3Q8IZU3 236 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 PDCL2Q8N4E4 241 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 CELF5Q8N6W0 485 aaKnown RBP20.27■□□□□ 0.84
CDKN3-209ENST00000556102 C1orf127Q8N9H9 656 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 TTC8Q8TAM2 541 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 CACTINQ8WUQ7 758 aaKnown RBP20.27■□□□□ 0.84
CDKN3-209ENST00000556102 SLC46A2Q9BY10 475 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 RBM12Q9NTZ6 932 aaKnown RBP20.27■□□□□ 0.84
CDKN3-209ENST00000556102 THG1LQ9NWX6 298 aaKnown RBP20.27■□□□□ 0.84
CDKN3-209ENST00000556102 RBAKQ9NYW8 714 aaPredicted RBP20.27■□□□□ 0.84
CDKN3-209ENST00000556102 GMEB2Q9UKD1 530 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 RAB23Q9ULC3 237 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 AGAP1Q9UPQ3 857 aa20.27■□□□□ 0.84
CDKN3-209ENST00000556102 PAPSS2O95340 614 aaPredicted RBP20.26■□□□□ 0.83
CDKN3-209ENST00000556102 ITGB3P05106 788 aa20.26■□□□□ 0.83
CDKN3-209ENST00000556102 NFE2Q16621 373 aaPredicted RBP20.26■□□□□ 0.83
CDKN3-209ENST00000556102 CMTM8Q8IZV2 173 aa20.26■□□□□ 0.83
CDKN3-209ENST00000556102 LRRC52Q8N7C0 313 aa20.26■□□□□ 0.83
CDKN3-209ENST00000556102 LEO1Q8WVC0 666 aaPredicted RBP20.26■□□□□ 0.83
CDKN3-209ENST00000556102 USP28Q96RU2 1077 aa20.26■□□□□ 0.83
CDKN3-209ENST00000556102 TMLHEQ9NVH6 421 aa20.26■□□□□ 0.83
CDKN3-209ENST00000556102 L1RE1Q9UN81 338 aa20.26■□□□□ 0.83
CDKN3-209ENST00000556102 A0A087X0B3 334 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 TULP1O00294 542 aaPredicted RBP20.25■□□□□ 0.83
CDKN3-209ENST00000556102 EXTL3O43909 919 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 HUS1O60921 280 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 F11P03951 625 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 CSH1P0DML2 217 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 CSH2P0DML3 217 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 HMGA1P17096 107 aaKnown RBP20.25■□□□□ 0.83
CDKN3-209ENST00000556102 SDHBP21912 280 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 DDX6P26196 483 aaKnown RBP eCLIP20.25■□□□□ 0.83
CDKN3-209ENST00000556102 NLRP12P59046 1061 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 TNK2Q07912 1038 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 SLC39A14Q15043 492 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 PON2Q15165 354 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 ITPRIPL2Q3MIP1 535 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 Q6ZS52 159 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 TMEM150AQ86TG1 271 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms