RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 MGAT3Q09327 533 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 CNGA2Q16280 664 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 PPP2R5EQ16537 467 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 SMG8Q8ND04 991 aaKnown RBP15.61■□□□□ 0.09
VPS33B-205ENST00000556096 FEZF2Q8TBJ5 459 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 HDAC7Q8WUI4 952 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 TWNKQ96RR1 684 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 KRT12Q99456 494 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 TUBGCP4Q9UGJ1 667 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 PARP2Q9UGN5 583 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 L1RE1Q9UN81 338 aa15.61■□□□□ 0.09
VPS33B-205ENST00000556096 TCRBV5S1A1TA0A578 114 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 PIRO00625 290 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 RPS6KA5O75582 802 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 FGGP02679 453 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 TNFRSF8P28908 595 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 RWDD2BP57060 319 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 TAP1Q03518 808 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 C2CD6Q53TS8 623 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 C9orf57Q5W0N0 161 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 TWF2Q6IBS0 349 aaKnown RBP15.6■□□□□ 0.09
VPS33B-205ENST00000556096 DENND1BQ6P3S1 775 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 ERICH1Q86X53 443 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 ARRDC4Q8NCT1 418 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 C18orf25Q96B23 403 aaPredicted RBP15.6■□□□□ 0.09
VPS33B-205ENST00000556096 APOL6Q9BWW8 343 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 FUT8Q9BYC5 575 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 OGFRQ9NZT2 677 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 STRIP2Q9ULQ0 834 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 ST3GAL5Q9UNP4 418 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 TRIP11Q15643 1979 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 KBTBD13C9JR72 458 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 CHRNA1P02708 482 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 MAN1A1P33908 653 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 NDST1P52848 882 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 STILQ15468 1287 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 LLGL2Q6P1M3 1020 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 PHLDB2Q86SQ0 1253 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 WNT8BQ93098 351 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 PAWRQ96IZ0 340 aaKnown RBP15.6■□□□□ 0.09
VPS33B-205ENST00000556096 TSEN34Q9BSV6 310 aaKnown RBP15.6■□□□□ 0.09
VPS33B-205ENST00000556096 NT5C1AQ9BXI3 368 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 AP1M1Q9BXS5 423 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 TRIM7Q9C029 511 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 SLITRK6Q9H5Y7 841 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 HMGXB4Q9UGU5 601 aa15.6■□□□□ 0.09
VPS33B-205ENST00000556096 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.6■□□□□ 0.09
VPS33B-205ENST00000556096 PDCD11Q14690 1871 aaKnown RBP15.59■□□□□ 0.09
VPS33B-205ENST00000556096 TMEM191CA6NGB0 347 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 MOXD2PA6NHM9 499 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 GPR182O15218 404 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 PNPLA4P41247 253 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 MARCKSL1P49006 195 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 ATN1P54259 1190 aaPredicted RBP15.59■□□□□ 0.09
VPS33B-205ENST00000556096 GSCP56915 257 aaPredicted RBP15.59■□□□□ 0.09
VPS33B-205ENST00000556096 SLC7A5Q01650 507 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 ZNF211Q13398 564 aaPredicted RBP15.59■□□□□ 0.09
VPS33B-205ENST00000556096 SGO2Q562F6 1265 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 GLRA4Q5JXX5 417 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 SEL1L2Q5TEA6 688 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 CPNE8Q86YQ8 564 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 KLHL7Q8IXQ5 586 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 IFT20Q8IY31 132 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.59■□□□□ 0.09
VPS33B-205ENST00000556096 HEXIM2Q96MH2 286 aaKnown RBP15.59■□□□□ 0.09
VPS33B-205ENST00000556096 ZNF560Q96MR9 790 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 PLVAPQ9BX97 442 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 GDF3Q9NR23 364 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 IP6K2Q9UHH9 426 aa15.59■□□□□ 0.09
VPS33B-205ENST00000556096 MKI67P46013 3256 aaKnown RBP15.58■□□□□ 0.09
VPS33B-205ENST00000556096 A0A1W2PQ45 241 aaPredicted RBP15.58■□□□□ 0.08
VPS33B-205ENST00000556096 A0A1W2PQY0 241 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 O00370 1275 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 DNM1LO00429 736 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 MAP2K7O14733 419 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 PPEF2O14830 753 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 SART1O43290 800 aaKnown RBP15.58■□□□□ 0.08
VPS33B-205ENST00000556096 ZMYND10O75800 440 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 PYGMP11217 842 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 PTK7Q13308 1070 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 PTGISQ16647 500 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 PPP1R15BQ5SWA1 713 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 DNAJC24Q6P3W2 148 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 LCLAT1Q6UWP7 414 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 HDXQ7Z353 690 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 UNC93AQ86WB7 457 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 HACE1Q8IYU2 909 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 C3orf20Q8ND61 904 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 GDAP2Q9NXN4 497 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 KLK14Q9P0G3 267 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 WDR35Q9P2L0 1181 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.58■□□□□ 0.08
VPS33B-205ENST00000556096 SNX9Q9Y5X1 595 aa15.58■□□□□ 0.08
VPS33B-205ENST00000556096 GOLGA6L10A0A0M3HER8 536 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 RAD51CO43502 376 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 MICAL2O94851 1124 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 HEXIM1O94992 359 aaKnown RBP15.57■□□□□ 0.08
VPS33B-205ENST00000556096 ITGA4P13612 1032 aa15.57■□□□□ 0.08
VPS33B-205ENST00000556096 ITGA7Q13683 1181 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms