RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 XPAP23025 273 aaPredicted RBP18.27■□□□□ 0.52
SYNE3-204ENST00000555759 LTKP29376 864 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 MEA1Q16626 185 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 CLEC4GQ6UXB4 293 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 CCDC60Q8IWA6 550 aaPredicted RBP18.27■□□□□ 0.52
SYNE3-204ENST00000555759 RMND5BQ96G75 393 aaPredicted RBP18.27■□□□□ 0.52
SYNE3-204ENST00000555759 EHD4Q9H223 541 aa18.27■□□□□ 0.52
SYNE3-204ENST00000555759 C3orf70A6NLC5 250 aaPredicted RBP18.27■□□□□ 0.51
SYNE3-204ENST00000555759 SNX3O60493 162 aa18.27■□□□□ 0.51
SYNE3-204ENST00000555759 PSMG1O95456 288 aa18.27■□□□□ 0.51
SYNE3-204ENST00000555759 PEX5P50542 639 aa18.27■□□□□ 0.51
SYNE3-204ENST00000555759 OR6P1Q8NGX9 317 aa18.27■□□□□ 0.51
SYNE3-204ENST00000555759 PPP1R2P1Q96PQ5 205 aa18.27■□□□□ 0.51
SYNE3-204ENST00000555759 TRIM45Q9H8W5 580 aaPredicted RBP18.27■□□□□ 0.51
SYNE3-204ENST00000555759 HACD3Q9P035 362 aa18.27■□□□□ 0.51
SYNE3-204ENST00000555759 E5RI56 91 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 C21orf59P57076 290 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 Q4G0T1 1027 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 C12orf60Q5U649 245 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 PAFAH2Q99487 392 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 DAPK2Q9UIK4 370 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 ATP6V1C1P21283 382 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 MROH9Q5TGP6 573 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 CENPPQ6IPU0 288 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 NLRP4Q96MN2 994 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 RBBP8Q99708 897 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 GORASP1Q9BQQ3 440 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 GOLGA8TH3BQL2 631 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 GRAPQ13588 217 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 LBRQ14739 615 aaKnown RBP18.26■□□□□ 0.51
SYNE3-204ENST00000555759 MTFR1Q15390 333 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 SNRNP35Q16560 246 aaKnown RBP18.26■□□□□ 0.51
SYNE3-204ENST00000555759 ERMARDQ5T6L9 678 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 GRAPLQ8TC17 118 aaPredicted RBP18.26■□□□□ 0.51
SYNE3-204ENST00000555759 MTMR8Q96EF0 704 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 VPS50Q96JG6 964 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 PACSIN1Q9BY11 444 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 UNC5CO95185 931 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.26■□□□□ 0.51
SYNE3-204ENST00000555759 CCNG2Q16589 344 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 RNF43Q68DV7 783 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 SLC44A5Q8NCS7 719 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 ZNF556Q9HAH1 456 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 F5H423 210 aaPredicted RBP18.26■□□□□ 0.51
SYNE3-204ENST00000555759 MLH1P40692 756 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 SNAP25P60880 206 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 ZBTB49Q6ZSB9 765 aa18.26■□□□□ 0.51
SYNE3-204ENST00000555759 TOPORSQ9NS56 1045 aaPredicted RBP18.26■□□□□ 0.51
SYNE3-204ENST00000555759 DDX18Q9NVP1 670 aaKnown RBP18.26■□□□□ 0.51
SYNE3-204ENST00000555759 WFS1O76024 890 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 SOX6P35712 828 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 XRCC4Q13426 336 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 SLC45A4Q5BKX6 768 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 RFWD2Q8NHY2 731 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 NDEL1Q9GZM8 345 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 COA1Q9GZY4 146 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 POLR3FQ9H1D9 316 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 FEM1BQ9UK73 627 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 SESN1Q9Y6P5 492 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 PRR23D1E9PI22 279 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 PRR23D2P0DMB1 279 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 OTUD4Q01804 1114 aaKnown RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 ZNF662Q6ZS27 426 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 ABCA8O94911 1581 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 ATMINO43313 823 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 ASNA1O43681 348 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 TBL3Q12788 808 aaKnown RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 CEP78Q5JTW2 689 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 SLC26A11Q86WA9 606 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 FBXO36Q8NEA4 188 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 TMEM79Q9BSE2 394 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 MYRFQ9Y2G1 1151 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 CCDC78A2IDD5 438 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 FCHO1O14526 889 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 LZTS3O60299 673 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 PDGFRAP16234 1089 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 KYAT1Q16773 422 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 C6orf10Q5SRN2 563 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 PTPRN2Q92932 1015 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 FAM162AQ96A26 154 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 OXNAD1Q96HP4 312 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 GPBP1L1Q9HC44 474 aaPredicted RBP18.25■□□□□ 0.51
SYNE3-204ENST00000555759 STARD13Q9Y3M8 1113 aa18.25■□□□□ 0.51
SYNE3-204ENST00000555759 GLI2P10070 1586 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 TTKP33981 857 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 PHKA2P46019 1235 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 TAGAPQ8N103 731 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 FBXL16Q8N461 479 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 CALML6Q8TD86 181 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 ASAP3Q8TDY4 903 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 NR1H4Q96RI1 486 aaPredicted RBP18.24■□□□□ 0.51
SYNE3-204ENST00000555759 FAM118BQ9BPY3 351 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 ABCF3Q9NUQ8 709 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 PCDHGB4Q9UN71 923 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 C4BPBP20851 252 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 POLD1P28340 1107 aa18.24■□□□□ 0.51
SYNE3-204ENST00000555759 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms