RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 KCNJ12Q14500 433 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 SV2CQ496J9 727 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 CCDC40Q4G0X9 1142 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 PABPC1LQ4VXU2 614 aaKnown RBP10.35□□□□□ -0.75
ACTN1-215ENST00000555616 CEP135Q66GS9 1140 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 RNF19BQ6ZMZ0 732 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 FILIP1Q7Z7B0 1213 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 CBWD2Q8IUF1 395 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 NPAS3Q8IXF0 933 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 FBXL6Q8N531 539 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 LRRC52Q8N7C0 313 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 XXYLT1Q8NBI6 393 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 ITFG1Q8TB96 612 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 ANP32BQ92688 251 aaKnown RBP10.35□□□□□ -0.75
ACTN1-215ENST00000555616 NXPE3Q969Y0 559 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 BORCS6Q96GS4 357 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 CNOT6LQ96LI5 555 aaKnown RBP10.35□□□□□ -0.75
ACTN1-215ENST00000555616 MKNK1Q9BUB5 465 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 PCIF1Q9H4Z3 704 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 CYP4F11Q9HBI6 524 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 METTL14Q9HCE5 456 aaKnown RBP10.35□□□□□ -0.75
ACTN1-215ENST00000555616 PDE11AQ9HCR9 933 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 HCFC1R1Q9NWW0 138 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 HSPBP1Q9NZL4 362 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 DNMT3BQ9UBC3 853 aaKnown RBP10.35□□□□□ -0.75
ACTN1-215ENST00000555616 ITGA11Q9UKX5 1188 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 CDH7Q9ULB5 785 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 DUSP12Q9UNI6 340 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 YIPF1Q9Y548 306 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 ZNF318Q5VUA4 2279 aa10.35□□□□□ -0.75
ACTN1-215ENST00000555616 PTPRJQ12913 1337 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 ZNF233A6NK53 670 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 KPNA7A9QM74 516 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 MAPK13O15264 365 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 SERPINC1P01008 464 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 ITGB3P05106 788 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 RHOP08100 348 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 OR4Q2P0C623 313 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 POLR2BP30876 1174 aaKnown RBP10.34□□□□□ -0.75
ACTN1-215ENST00000555616 MTIF2P46199 727 aaKnown RBP10.34□□□□□ -0.75
ACTN1-215ENST00000555616 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 SNRNP35Q16560 246 aaKnown RBP10.34□□□□□ -0.75
ACTN1-215ENST00000555616 HSP90AA4PQ58FG1 418 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 TCP11X2Q5H9J9 407 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 FAM186BQ8IYM0 893 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 OR10T2Q8NGX3 314 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 CACTINQ8WUQ7 758 aaKnown RBP10.34□□□□□ -0.75
ACTN1-215ENST00000555616 FGF13Q92913 245 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 PBXIP1Q96AQ6 731 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 EEF2KMTQ96G04 330 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 FAM84AQ96KN4 292 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 RTP3Q9BQQ7 232 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 MTMR12Q9C0I1 747 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 DMAC2Q9NW81 257 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 HSFX1Q9UBD0 423 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 ARMCX3Q9UH62 379 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-215ENST00000555616 SIX4Q9UIU6 781 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 ZDBF2Q9HCK1 2354 aa10.34□□□□□ -0.75
ACTN1-215ENST00000555616 MTMR11A4FU01 709 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 CYB561D2O14569 222 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 CBFA2T2O43439 604 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 MICAL2O94851 1124 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 TMEM191BP0C7N4 346 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 ATP1A3P13637 1013 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 KRT13P13646 458 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 EPHA5P54756 1037 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 MARSP56192 900 aaKnown RBP10.33□□□□□ -0.76
ACTN1-215ENST00000555616 PLD1Q13393 1074 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 PSMD6Q15008 389 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 SURF1Q15526 300 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 SLC5A9Q2M3M2 681 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 FILIP1LQ4L180 1135 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 PRSS36Q5K4E3 855 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 WSCD1Q658N2 575 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 SARM1Q6SZW1 724 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 INTS8Q75QN2 995 aaKnown RBP10.33□□□□□ -0.76
ACTN1-215ENST00000555616 FRMD5Q7Z6J6 570 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 IRF2BP1Q8IU81 584 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 WDR49Q8IV35 697 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 SUGP1Q8IWZ8 645 aaKnown RBP10.33□□□□□ -0.76
ACTN1-215ENST00000555616 SLC44A3Q8N4M1 653 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 LEMD2Q8NC56 503 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 OR5B17Q8NGF7 314 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 RSAD2Q8WXG1 361 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 PGLYRP2Q96PD5 576 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 ZCWPW1Q9H0M4 648 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 HSD3B7Q9H2F3 369 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 CRISPLD1Q9H336 500 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 INTS13Q9NVM9 706 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 GDAP2Q9NXN4 497 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 CEP72Q9P209 647 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 LIMA1Q9UHB6 759 aaKnown RBP10.33□□□□□ -0.76
ACTN1-215ENST00000555616 AGAP1Q9UPQ3 857 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 MRPS23Q9Y3D9 190 aaKnown RBP10.33□□□□□ -0.76
ACTN1-215ENST00000555616 NUMBLQ9Y6R0 609 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 DOCK8Q8NF50 2099 aa10.33□□□□□ -0.76
ACTN1-215ENST00000555616 KMT2EQ8IZD2 1858 aa10.32□□□□□ -0.76
ACTN1-215ENST00000555616 AKAP3O75969 853 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms