RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ASB7Q9H672 318 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 CWC15Q9P013 229 aaKnown RBP25.69■■□□□ 1.7
TMEM260-207ENST00000555497 TRIP11Q15643 1979 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 HOXD8P13378 290 aaPredicted RBP25.68■■□□□ 1.7
TMEM260-207ENST00000555497 POLR2BP30876 1174 aaKnown RBP25.68■■□□□ 1.7
TMEM260-207ENST00000555497 GPR162Q16538 588 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 CCNG2Q16589 344 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 DENND2CQ68D51 928 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 MFSD7Q6UXD7 560 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 OR6J1Q8NGC5 347 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 UHMK1Q8TAS1 419 aaKnown RBP25.68■■□□□ 1.7
TMEM260-207ENST00000555497 CCDC114Q96M63 670 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 SLITRK1Q96PX8 696 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 TINF2Q9BSI4 451 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 CXCL16Q9H2A7 254 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 TMEM51Q9NW97 253 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 CEP83Q9Y592 693 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 PCNTO95613 3336 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 CITO14578 2027 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 GOLGA8SH3BPF8 625 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 TULP2O00295 520 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 ECM2O94769 699 aaPredicted RBP25.68■■□□□ 1.7
TMEM260-207ENST00000555497 MDH1P40925 334 aaKnown RBP25.68■■□□□ 1.7
TMEM260-207ENST00000555497 IRX5P78411 483 aaPredicted RBP25.68■■□□□ 1.7
TMEM260-207ENST00000555497 CALCOCO2Q13137 446 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 BCAS4Q8TDM0 211 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 SCLT1Q96NL6 688 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 SETD4Q9NVD3 440 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 RSPH14Q9UHP6 348 aa25.68■■□□□ 1.7
TMEM260-207ENST00000555497 A0A1B0GUA9 196 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 CILPO75339 1184 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 PAEPP09466 180 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 RARGP13631 454 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 LSP1P33241 339 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 RFC1P35251 1148 aaPredicted RBP25.67■■□□□ 1.7
TMEM260-207ENST00000555497 CHKAP35790 457 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 MAGOHP61326 146 aaKnown RBP25.67■■□□□ 1.7
TMEM260-207ENST00000555497 SYDE1Q6ZW31 735 aaPredicted RBP25.67■■□□□ 1.7
TMEM260-207ENST00000555497 PRUNE1Q86TP1 453 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 CCDC25Q86WR0 208 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 RCOR2Q8IZ40 523 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 JOSD2Q8TAC2 188 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 CPXM1Q96SM3 734 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 GBA2Q9HCG7 927 aaPredicted RBP25.67■■□□□ 1.7
TMEM260-207ENST00000555497 AGAP1Q9UPQ3 857 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 DOCK3Q8IZD9 2030 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 TMEM132DQ14C87 1099 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 SPRYD7Q5W111 196 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 KAZNQ674X7 775 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 PLEKHH3Q7Z736 793 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 RAPGEF5Q92565 580 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 TLCD1Q96CP7 247 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 VRTNQ9H8Y1 702 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 SLC12A6Q9UHW9 1150 aa25.67■■□□□ 1.7
TMEM260-207ENST00000555497 A6NNZ2 444 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 RIPK2O43353 540 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 KRT1P04264 644 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 VPS41P49754 854 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 PTPN11Q06124 597 aaPredicted RBP25.66■■□□□ 1.7
TMEM260-207ENST00000555497 KIZQ2M2Z5 673 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 TUBB8Q3ZCM7 444 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 LRRC38Q5VT99 294 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 GRK7Q8WTQ7 553 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 SNF8Q96H20 258 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 HPDLQ96IR7 371 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 FAM129AQ9BZQ8 928 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 ABHD16BQ9H3Z7 469 aa25.66■■□□□ 1.7
TMEM260-207ENST00000555497 ITIH2P19823 946 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 ITGA8P53708 1063 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 TAP1Q03518 808 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 TMEM62Q0P6H9 643 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 PIGHQ14442 188 aaPredicted RBP25.65■■□□□ 1.7
TMEM260-207ENST00000555497 SLMAPQ14BN4 828 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 PRAMEF19Q5SWL8 479 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 ARFGAP1Q8N6T3 406 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 NIPA2Q8N8Q9 360 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 HOMER3Q9NSC5 361 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 MED7O43513 233 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 GAS8O95995 478 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 ERBB2P04626 1255 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 ATICP31939 592 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 DGKDQ16760 1214 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 ZFYVE27Q5T4F4 411 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 TMEM176AQ96HP8 235 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 FAXDC2Q96IV6 333 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 ACAP3Q96P50 834 aa25.65■■□□□ 1.7
TMEM260-207ENST00000555497 SIGLEC16A6NMB1 481 aa25.64■■□□□ 1.7
TMEM260-207ENST00000555497 MICAL2O94851 1124 aa25.64■■□□□ 1.7
TMEM260-207ENST00000555497 FAM110CQ1W6H9 321 aa25.64■■□□□ 1.7
TMEM260-207ENST00000555497 SMYD5Q6GMV2 418 aa25.64■■□□□ 1.7
TMEM260-207ENST00000555497 SPOCD1Q6ZMY3 1216 aa25.64■■□□□ 1.7
TMEM260-207ENST00000555497 RBM41Q96IZ5 413 aaKnown RBP25.64■■□□□ 1.7
TMEM260-207ENST00000555497 DDX23Q9BUQ8 820 aaKnown RBP25.64■■□□□ 1.7
TMEM260-207ENST00000555497 CDHR5Q9HBB8 845 aa25.64■■□□□ 1.7
TMEM260-207ENST00000555497 DPP3Q9NY33 737 aa25.64■■□□□ 1.7
TMEM260-207ENST00000555497 FEZ2Q9UHY8 353 aaPredicted RBP25.64■■□□□ 1.7
TMEM260-207ENST00000555497 ATF7P17544 494 aaPredicted RBP25.64■■□□□ 1.69
TMEM260-207ENST00000555497 CCT5P48643 541 aa25.64■■□□□ 1.69
TMEM260-207ENST00000555497 PSMC1P62191 440 aaKnown RBP25.64■■□□□ 1.69
TMEM260-207ENST00000555497 PPP2R2AP63151 447 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms