RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 OSTM1Q86WC4 334 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 NPAS4Q8IUM7 802 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 TTC16Q8NEE8 873 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 APBB2Q92870 758 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 BTBD6Q96KE9 485 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.84□□□□□ -0.672e-10■□□□□ 8.1
NEK9-205ENST00000555405 FBXL5Q9UKA1 691 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 HNRNPH3P31942 346 aaKnown RBP10.84□□□□□ -0.67
NEK9-205ENST00000555405 PNPLA4P41247 253 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 SLC11A1P49279 550 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 BMS1Q14692 1282 aaKnown RBP10.84□□□□□ -0.67
NEK9-205ENST00000555405 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
NEK9-205ENST00000555405 SCN4BQ8IWT1 228 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 TNS4Q8IZW8 715 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 SLC35F6Q8N357 371 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 LRRC52Q8N7C0 313 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 CXorf38Q8TB03 319 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 TAF4BQ92750 862 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 ADAM22Q9P0K1 906 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 TJP2Q9UDY2 1190 aa10.84□□□□□ -0.67
NEK9-205ENST00000555405 PACSIN2Q9UNF0 486 aaPredicted RBP10.84□□□□□ -0.67
NEK9-205ENST00000555405 FTCDO95954 541 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 RPL17P18621 184 aaKnown RBP10.83□□□□□ -0.67
NEK9-205ENST00000555405 VAV2P52735 878 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 PDE4CQ08493 712 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 UPP1Q16831 310 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 GOLGA7BQ2TAP0 167 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 TMEM173Q86WV6 379 aaPredicted RBP10.83□□□□□ -0.67
NEK9-205ENST00000555405 STKLD1Q8NE28 680 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 SLC2A14Q8TDB8 520 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 TMEM209Q96SK2 561 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 ZSWIM1Q9BR11 485 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 HTATIP2Q9BUP3 242 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 RHOBTB2Q9BYZ6 727 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 OSGEPQ9NPF4 335 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 KANSL3Q9P2N6 904 aa10.83□□□□□ -0.67
NEK9-205ENST00000555405 ANO9A1A5B4 782 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 GRXCR1A8MXD5 290 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 CCP110O43303 1012 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 CILPO75339 1184 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 TKTP29401 623 aaKnown RBP10.83□□□□□ -0.68
NEK9-205ENST00000555405 MESDQ14696 234 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 OVOS1Q6IE37 1185 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 ERICH1Q86X53 443 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 AUTS2Q8WXX7 1259 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 SECISBP2LQ93073 1101 aaKnown RBP10.83□□□□□ -0.68
NEK9-205ENST00000555405 ARHGEF26Q96DR7 871 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 FAM81BQ96LP2 452 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 WDR24Q96S15 920 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 GPR62Q9BZJ7 368 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 CNOT8Q9UFF9 292 aaKnown RBP10.83□□□□□ -0.68
NEK9-205ENST00000555405 TSPAN16Q9UKR8 245 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 MYO6Q9UM54 1294 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 MYBPHLA2RUH7 354 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 TULP2O00295 520 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 LCP1P13796 627 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 PRKCIP41743 596 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 WDR5P61964 334 aaKnown RBP10.83□□□□□ -0.68
NEK9-205ENST00000555405 OR6B2Q6IFH4 312 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 WHAMMQ8TF30 809 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
NEK9-205ENST00000555405 CASD1Q96PB1 797 aa10.83□□□□□ -0.68
NEK9-205ENST00000555405 NOCTQ9UK39 431 aaKnown RBP10.83□□□□□ -0.68
NEK9-205ENST00000555405 CASQ1P31415 396 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 FAM189BP81408 668 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 SDHAF4Q5VUM1 108 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 DCLRE1AQ6PJP8 1040 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 MICAL1Q8TDZ2 1067 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 CYP3A43Q9HB55 503 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 ABI2Q9NYB9 513 aaPredicted RBP10.82□□□□□ -0.68
NEK9-205ENST00000555405 SALL4Q9UJQ4 1053 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 SYNJ2BP-COX16A0A087WUM0 186 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 KIAA0355O15063 1070 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 NCK2O43639 380 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 MICAL2O94851 1124 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 ODC1P11926 461 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 CPB1P15086 417 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 CXCR5P32302 372 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 YWHAHQ04917 246 aaPredicted RBP10.82□□□□□ -0.68
NEK9-205ENST00000555405 NAB2Q15742 525 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 DCUN1D2Q6PH85 259 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 C16orf59Q7L2K0 433 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 FMNL3Q8IVF7 1028 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 TMEM35BQ8NCS4 154 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 NDRG1Q92597 394 aaKnown RBP10.82□□□□□ -0.68
NEK9-205ENST00000555405 SYT15Q9BQS2 421 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 COLEC11Q9BWP8 271 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 IL23AQ9NPF7 189 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 COX16Q9P0S2 106 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 SLC4A7Q9Y6M7 1214 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 CYP3A5P20815 502 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 RRM1P23921 792 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 LRPAP1P30533 357 aa10.82□□□□□ -0.68
NEK9-205ENST00000555405 RPL9P32969 192 aaKnown RBP10.82□□□□□ -0.68
NEK9-205ENST00000555405 MAPK8IP2Q13387 824 aaPredicted RBP10.82□□□□□ -0.68
NEK9-205ENST00000555405 PPIGQ13427 754 aaKnown RBP eCLIP10.82□□□□□ -0.689e-10■□□□□ 10.6
NEK9-205ENST00000555405 XKR4Q5GH76 650 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms