RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZNF197O14709 1029 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 STAU1O95793 577 aaKnown RBP12.96□□□□□ -0.33
SRP54-206ENST00000555317 RHOP08100 348 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 TRIM49P0CI25 452 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 TRIM49CP0CI26 452 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 TRIM21P19474 475 aaKnown RBP12.96□□□□□ -0.33
SRP54-206ENST00000555317 ACAT1P24752 427 aaKnown RBP12.96□□□□□ -0.33
SRP54-206ENST00000555317 CCNE1P24864 410 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 DLG4P78352 724 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 CLDN10P78369 228 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 NTHL1P78549 312 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 ENPEPQ07075 957 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 MTMR3Q13615 1198 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 MORC3Q14149 939 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 PTPN21Q16825 1174 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 SOWAHAQ2M3V2 549 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 SGSM1Q2NKQ1 1148 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 MGAT5BQ3V5L5 792 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 DCAF17Q5H9S7 520 aaPredicted RBP12.96□□□□□ -0.33
SRP54-206ENST00000555317 INTS6LQ5JSJ4 861 aaKnown RBP12.96□□□□□ -0.33
SRP54-206ENST00000555317 TCERG1LQ5VWI1 586 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 ANKRD40Q6AI12 368 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 CLEC17AQ6ZS10 378 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 ITIH5Q86UX2 942 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 TRIML1Q8N9V2 468 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 ATAD1Q8NBU5 361 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 LEMD2Q8NC56 503 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 NELFBQ8WX92 580 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 EEF2KMTQ96G04 330 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 RTP3Q9BQQ7 232 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 GZF1Q9H116 711 aaPredicted RBP12.96□□□□□ -0.33
SRP54-206ENST00000555317 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 HSFX1Q9UBD0 423 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 CTNND2Q9UQB3 1225 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 SLC27A5Q9Y2P5 690 aa12.96□□□□□ -0.33
SRP54-206ENST00000555317 ZFP37Q9Y6Q3 630 aaPredicted RBP12.96□□□□□ -0.33
SRP54-206ENST00000555317 TRIM49BA6NDI0 452 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 CST3P01034 146 aaPredicted RBP12.95□□□□□ -0.34
SRP54-206ENST00000555317 C4BPAP04003 597 aaKnown RBP12.95□□□□□ -0.34
SRP54-206ENST00000555317 WARSP23381 471 aaKnown RBP12.95□□□□□ -0.34
SRP54-206ENST00000555317 GNL1P36915 607 aaPredicted RBP12.95□□□□□ -0.34
SRP54-206ENST00000555317 GCLMP48507 274 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 PAK1Q13153 545 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 MAPRE1Q15691 268 aaKnown RBP12.95□□□□□ -0.34
SRP54-206ENST00000555317 ZACNQ401N2 412 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 CCDC40Q4G0X9 1142 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 SCARA3Q6AZY7 606 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 C4orf50Q6ZRC1 276 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 SPATA2LQ8IUW3 424 aaPredicted RBP12.95□□□□□ -0.34
SRP54-206ENST00000555317 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 TAF4BQ92750 862 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 MYADMQ96S97 322 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 SYT15Q9BQS2 421 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 NUP62CLQ9H1M0 184 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 CLSTN2Q9H4D0 955 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 EPHX3Q9H6B9 360 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 EPS15L1Q9UBC2 864 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
SRP54-206ENST00000555317 ARMCX3Q9UH62 379 aaPredicted RBP12.95□□□□□ -0.34
SRP54-206ENST00000555317 CDH9Q9ULB4 789 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 SORCS3Q9UPU3 1222 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
SRP54-206ENST00000555317 TACC1O75410 805 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 FGFR1OPO95684 399 aaKnown RBP12.94□□□□□ -0.34
SRP54-206ENST00000555317 FGF19O95750 216 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 HLA-DRAP01903 254 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 ASGR2P07307 311 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 PDGFRBP09619 1106 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 MYL4P12829 197 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 GTF2H1P32780 548 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 MXI1P50539 228 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 CDR1P51861 262 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 KRT39Q6A163 491 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 MTSS1LQ765P7 747 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 OSTM1Q86WC4 334 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 UBALD2Q8IYN6 164 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 KBTBD7Q8WVZ9 684 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 ING5Q8WYH8 240 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.342e-7■□□□□ 9.6
SRP54-206ENST00000555317 CEP63Q96MT8 703 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 GCNAQ96QF7 691 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 PI4K2AQ9BTU6 479 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 SLITRK6Q9H5Y7 841 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 VRTNQ9H8Y1 702 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 TMEM8AQ9HCN3 771 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 ABCB6Q9NP58 842 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 AVENQ9NQS1 362 aaPredicted RBP12.94□□□□□ -0.34
SRP54-206ENST00000555317 IGSF9Q9P2J2 1179 aa12.94□□□□□ -0.34
SRP54-206ENST00000555317 NOTCH4Q99466 2003 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 A8MXQ7 604 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 GABRDO14764 452 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 N4BP1O75113 896 aaKnown RBP12.93□□□□□ -0.34
SRP54-206ENST00000555317 SOAT2O75908 522 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 VNN1O95497 513 aa12.93□□□□□ -0.34
SRP54-206ENST00000555317 VNN2O95498 520 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms