RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 GPR17Q13304 367 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 MAPRE1Q15691 268 aaKnown RBP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 ZNF667Q5HYK9 610 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 WSCD1Q658N2 575 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 C15orf39Q6ZRI6 1047 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 CREBRFQ8IUR6 639 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 CMASQ8NFW8 434 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 CXorf38Q8TB03 319 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 EEF2KMTQ96G04 330 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 RIPOR3Q96MK2 946 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 DUSP9Q99956 384 aaKnown RBP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 ACBD6Q9BR61 282 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 RHOBTB2Q9BYZ6 727 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 ADAM7Q9H2U9 754 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 SNX25Q9H3E2 840 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 THAP9Q9H5L6 903 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 FAM124BQ9H5Z6 455 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 SFXN1Q9H9B4 322 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 HSFX1Q9UBD0 423 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 AFF4Q9UHB7 1163 aaKnown RBP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 TIMM13Q9Y5L4 95 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-206ENST00000555046 PTPRSQ13332 1948 aa11.36□□□□□ -0.59
TMEM260-206ENST00000555046 MYO7AQ13402 2215 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 PROB1E7EW31 1015 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 PRRG1O14668 218 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 PPEF2O14830 753 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 XYLBO75191 536 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 TACC1O75410 805 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 ABLIM3O94929 683 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 TPM2P07951 284 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 CPB1P15086 417 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 RPL17P18621 184 aaKnown RBP11.35□□□□□ -0.59
TMEM260-206ENST00000555046 IGFBP6P24592 240 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-206ENST00000555046 HOXA9P31269 272 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 LTBRP36941 435 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 PIK3CAP42336 1068 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 MTHFRP42898 656 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 GCLMP48507 274 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 TUFMP49411 452 aaKnown RBP11.35□□□□□ -0.59
TMEM260-206ENST00000555046 MXI1P50539 228 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 MARSP56192 900 aaKnown RBP11.35□□□□□ -0.59
TMEM260-206ENST00000555046 ARPP19P56211 112 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 MYL6P60660 151 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 SMAD4Q13485 552 aaKnown RBP11.35□□□□□ -0.59
TMEM260-206ENST00000555046 NFE2Q16621 373 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-206ENST00000555046 STX1AQ16623 288 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 ZNF699Q32M78 642 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 DCAF17Q5H9S7 520 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-206ENST00000555046 PDCL2Q8N4E4 241 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 FBXL13Q8NEE6 735 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 ENOX1Q8TC92 643 aaKnown RBP11.35□□□□□ -0.59
TMEM260-206ENST00000555046 MSLNLQ96KJ4 702 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 CYP3A43Q9HB55 503 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 RAB20Q9NX57 234 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 CLEC1BQ9P126 229 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
TMEM260-206ENST00000555046 RALGAPA2Q2PPJ7 1873 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 H3BQ06 376 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 GABRDO14764 452 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 LINC01565O15544 149 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 ZMYND10O75800 440 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 CAVIN2O95810 425 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 HLA-DRAP01903 254 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 EPCAMP16422 314 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 WARSP23381 471 aaKnown RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 ZP2Q05996 745 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 PPP3CAQ08209 521 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 PLD1Q13393 1074 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 SOWAHAQ2M3V2 549 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 DPCR1Q3MIW9 517 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 PPM1LQ5SGD2 360 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 PTCRAQ6ISU1 281 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 CAVIN1Q6NZI2 390 aaKnown RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 LIMS2Q7Z4I7 341 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 GLYCTKQ8IVS8 523 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 TCEAL8Q8IYN2 117 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 ADGRF2Q8IZF7 708 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 ELMOD1Q8N336 334 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 SMRP1Q8NCR6 262 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 ANKRD20A12PQ8NF67 263 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 VN1R2Q8NFZ6 395 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 OR6B3Q8NGW1 331 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 PLEKHO2Q8TD55 490 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 TNIP3Q96KP6 325 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 GZF1Q9H116 711 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 S1PR5Q9H228 398 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 PIDD1Q9HB75 910 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 MAN1C1Q9NR34 630 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 DDX43Q9NXZ2 648 aaKnown RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 NXF1Q9UBU9 619 aaKnown RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 PRKAG3Q9UGI9 489 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 RALYQ9UKM9 306 aaKnown RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 CDH9Q9ULB4 789 aa11.34□□□□□ -0.59
TMEM260-206ENST00000555046 BARX2Q9UMQ3 279 aaPredicted RBP11.34□□□□□ -0.59
TMEM260-206ENST00000555046 CCDC195A0A1B0GUA6 201 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 GLP2RO95838 553 aa11.33□□□□□ -0.6
TMEM260-206ENST00000555046 ASS1P00966 412 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms