RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CLCN6P51797 869 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PKP1Q13835 747 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 MACC1Q6ZN28 852 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 BRINP3Q76B58 766 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 NLRP14Q86W24 1093 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 TM6SF1Q9BZW5 370 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 AGAP1Q9UPQ3 857 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ZBTB5O15062 677 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ABCB1P08183 1280 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ATP6V1B1P15313 513 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 GRK3P35626 688 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CCNIQ14094 377 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 AASDHQ4L235 1098 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 IQCF2Q8IXL9 164 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 C19orf18Q8NEA5 215 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 UCMAQ8WVF2 138 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 MED15Q96RN5 788 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 THUMPD3Q9BV44 507 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CATSPERBQ9H7T0 1116 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ZBTB1Q9Y2K1 713 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PRAG1Q86YV5 1406 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CIAO1O76071 339 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 TMEM132BQ14DG7 1078 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ZSWIM7Q19AV6 140 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 SSH2Q76I76 1423 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 SLC30A5Q8TAD4 765 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 SNRNP27Q8WVK2 155 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 KAT2BQ92831 832 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 FAM118BQ9BPY3 351 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ERAP1Q9NZ08 941 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ABCA10Q8WWZ4 1543 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 GOLGA8TH3BQL2 631 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 GSSP48637 474 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 LRRC74BQ6ZQY2 392 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 CYP4Z1Q86W10 505 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 RHOT1Q8IXI2 618 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PCYOX1LQ8NBM8 494 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PIF1Q9H611 641 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 CPSF4O95639 269 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 KRT16P08779 473 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PRPF39Q86UA1 669 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 VPS37AQ8NEZ2 397 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 STK33Q9BYT3 514 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 NMRK1Q9NWW6 199 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PEG3Q9GZU2 1588 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 MTHFD1LQ6UB35 978 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 NSUN7Q8NE18 718 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 FAM45AQ8TCE6 357 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 LGALS16A8MUM7 142 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 SOX6P35712 828 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 QARSP47897 775 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 KIF23Q02241 960 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF177Q13360 481 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 TDRD10Q5VZ19 366 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 CCDC33Q8N5R6 958 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PARK7Q99497 189 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 NLNQ9BYT8 704 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 WWP1Q9H0M0 922 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 DDX47Q9H0S4 455 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 SNTNA6NMZ2 147 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 CHL1O00533 1208 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PSMD3O43242 534 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 DSG3P32926 999 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 KCNH2Q12809 1159 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 UBE3CQ15386 1083 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 TRIM72Q6ZMU5 477 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 UNC13DQ70J99 1090 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 TTC39CQ8N584 583 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ECSITQ9BQ95 431 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 COA1Q9GZY4 146 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 IGFLR1Q9H665 355 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 MYOM2P54296 1465 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 SMIM31A0A1B0GVY4 71 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PHKG2P15735 406 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ALDH7A1P49419 539 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 CAMK1Q14012 370 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 POLD3Q15054 466 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 MTFR1Q15390 333 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 EDRF1Q3B7T1 1238 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 EMBQ6PCB8 327 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PALB2Q86YC2 1186 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 SH3GLB1Q9Y371 365 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 MIF4GDA9UHW6 222 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 NR5A2O00482 541 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 PRPF3O43395 683 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ASS1P00966 412 aaKnown RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ITGB6P18564 788 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ADD2P35612 726 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 RHAGQ02094 409 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 TRIM16LQ309B1 348 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 SRLQ86TD4 932 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF786Q8N393 782 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 CLIP3Q96DZ5 547 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 AVENQ9NQS1 362 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-216ENST00000555002 RHBDL2Q9NX52 303 aa7.16□□□□□ -1.26
SYNE2-216ENST00000555002 CHMP2BQ9UQN3 213 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms