RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 DDX43Q9NXZ2 648 aaKnown RBP15.29■□□□□ 0.04
SHOX2-206ENST00000554685 ADAMTS1Q9UHI8 967 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 CDH9Q9ULB4 789 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 RWDD3Q9Y3V2 267 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 PCDHB12Q9Y5F1 795 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 SCN1AP35498 2009 aa15.29■□□□□ 0.04
SHOX2-206ENST00000554685 FNDC1Q4ZHG4 1894 aaPredicted RBP15.29■□□□□ 0.04
SHOX2-206ENST00000554685 COL4A6Q14031 1691 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 TLL1O43897 1013 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 LCA5LO95447 670 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 ITGB1P05556 798 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 TAF3Q5VWG9 929 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 TMCO2Q7Z6W1 182 aaPredicted RBP15.28■□□□□ 0.04
SHOX2-206ENST00000554685 ZSCAN30Q86W11 494 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 GLYCTKQ8IVS8 523 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 COLGALT1Q8NBJ5 622 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 SP7Q8TDD2 431 aaPredicted RBP15.28■□□□□ 0.04
SHOX2-206ENST00000554685 ZNF606Q8WXB4 792 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 DDX1Q92499 740 aaKnown RBP15.28■□□□□ 0.04
SHOX2-206ENST00000554685 TMEM169Q96HH4 297 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 TWNKQ96RR1 684 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 ACBD6Q9BR61 282 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 SPG21Q9NZD8 308 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 HMGXB4Q9UGU5 601 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 PCDHGC3Q9UN70 934 aa15.28■□□□□ 0.04
SHOX2-206ENST00000554685 MRPL42Q9Y6G3 142 aaKnown RBP15.28■□□□□ 0.04
SHOX2-206ENST00000554685 ATP8B3O60423 1300 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 GOLGA6L9A6NEM1 432 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 H7C4K7 107 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 I3L4J1 428 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 DDX3XO00571 662 aaKnown RBP eCLIP15.27■□□□□ 0.04
SHOX2-206ENST00000554685 LSM8O95777 96 aaKnown RBP15.27■□□□□ 0.04
SHOX2-206ENST00000554685 MMEP08473 750 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 GZMAP12544 262 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 BRD2P25440 801 aaKnown RBP15.27■□□□□ 0.04
SHOX2-206ENST00000554685 MSNP26038 577 aaKnown RBP15.27■□□□□ 0.04
SHOX2-206ENST00000554685 TSPY1Q01534 308 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 FMO1Q01740 532 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 MTF1Q14872 753 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 MAPRE1Q15691 268 aaKnown RBP15.27■□□□□ 0.04
SHOX2-206ENST00000554685 CNGA2Q16280 664 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 FAM171A1Q5VUB5 890 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 ARHGAP17Q68EM7 881 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 ALKBH5Q6P6C2 394 aaKnown RBP15.27■□□□□ 0.04
SHOX2-206ENST00000554685 OSTM1Q86WC4 334 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 SLC39A11Q8N1S5 342 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 B3GALNT2Q8NCR0 500 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 SLC30A5Q8TAD4 765 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 SLC20A1Q8WUM9 679 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 IGSF21Q96ID5 467 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 SYT15Q9BQS2 421 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 ZNF518BQ9C0D4 1074 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 SPTLC3Q9NUV7 552 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 HCSTQ9UBK5 93 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 NAGPAQ9UK23 515 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 PYCARDQ9ULZ3 195 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 ADGRG1Q9Y653 693 aa15.27■□□□□ 0.04
SHOX2-206ENST00000554685 A0A087X0T9 212 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 OR6C75A6NL08 312 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 F8W810 466 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 OAZ2O95190 189 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 PDGFRBP09619 1106 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 FAM228BP0C875 321 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 CHRNB2P17787 502 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 FGFR3P22607 806 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 IGFBP6P24592 240 aaPredicted RBP15.26■□□□□ 0.03
SHOX2-206ENST00000554685 TKTP29401 623 aaKnown RBP15.26■□□□□ 0.03
SHOX2-206ENST00000554685 KRT17Q04695 432 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 GFPT1Q06210 699 aaPredicted RBP15.26■□□□□ 0.03
SHOX2-206ENST00000554685 USP41Q3LFD5 358 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 CCDC122Q5T0U0 273 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 ZNF280DQ6N043 979 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 TOGARAM2Q6ZUX3 1019 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 ANKS3Q6ZW76 656 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 KIAA1328Q86T90 577 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 ACOT1Q86TX2 421 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 TMEM35BQ8NCS4 154 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 MSANTD4Q8NCY6 345 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 LNX1Q8TBB1 728 aaPredicted RBP15.26■□□□□ 0.03
SHOX2-206ENST00000554685 KIAA1524Q8TCG1 905 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 CLP1Q92989 425 aaKnown RBP15.26■□□□□ 0.03
SHOX2-206ENST00000554685 UBE2OQ9C0C9 1292 aaKnown RBP15.26■□□□□ 0.03
SHOX2-206ENST00000554685 LHX5Q9H2C1 402 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 ACP6Q9NPH0 428 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 PCDH10Q9P2E7 1040 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 HESX1Q9UBX0 185 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 INTUQ9ULD6 942 aa15.26■□□□□ 0.03
SHOX2-206ENST00000554685 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHOX2-206ENST00000554685 TIMM13Q9Y5L4 95 aaPredicted RBP15.26■□□□□ 0.03
SHOX2-206ENST00000554685 NT5C1B-RDH14C9J2C7 533 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 O00370 1275 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 PTPN1P18031 435 aaKnown RBP15.25■□□□□ 0.03
SHOX2-206ENST00000554685 LMO2P25791 158 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 PBX3P40426 434 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 MAGEA1P43355 309 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 SLC8A3P57103 927 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 ORC1Q13415 861 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 CLEC16AQ2KHT3 1053 aa15.25■□□□□ 0.03
SHOX2-206ENST00000554685 INTS6LQ5JSJ4 861 aaKnown RBP15.25■□□□□ 0.03
SHOX2-206ENST00000554685 LCLAT1Q6UWP7 414 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms