RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PCDHGA2Q9Y5H1 932 aa5.45□□□□□ -1.54
ATXN3-229ENST00000554672 NCOR2Q9Y618 2525 aa5.45□□□□□ -1.54
ATXN3-229ENST00000554672 CCDC195A0A1B0GUA6 201 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 KANSL1LA0AUZ9 987 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 ANHXE9PGG2 379 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 MEIS1O00470 390 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 N4BP1O75113 896 aaKnown RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 ZC3H11AO75152 810 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 LRRN2O75325 713 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 C22orf31O95567 290 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 CCNE2O96020 404 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 F13A1P00488 732 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 C1RP00736 705 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 VTNP04004 478 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 CNPP09543 421 aaKnown RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 DMDP11532 3685 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 LAMP2P13473 410 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 GLULP15104 373 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 TGM1P22735 817 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 KIF5BP33176 963 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 ETV3P41162 512 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 MAGEA9P43362 315 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 NLRP11P59045 1033 aaKnown RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 CDC42EP1Q00587 391 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 CSTF1Q05048 431 aaKnown RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 SART3Q15020 963 aaKnown RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 CEP55Q53EZ4 464 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 TMEM201Q5SNT2 666 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 SWSAP1Q6NVH7 229 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 GLB1LQ6UWU2 654 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 MPZL3Q6UWV2 235 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 TMEM173Q86WV6 379 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 CREG2Q8IUH2 290 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 TEX2Q8IWB9 1127 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 ZBTB44Q8NCP5 570 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 PJA1Q8NG27 643 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 CTCFLQ8NI51 663 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 FEZF2Q8TBJ5 459 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 HDAC7Q8WUI4 952 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 MYADMQ96S97 322 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 MAP7D2Q96T17 732 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 PPP1R16BQ96T49 567 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 NELL2Q99435 816 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 NRDE2Q9H7Z3 1164 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 AGO4Q9HCK5 861 aaKnown RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 MRPL17Q9NRX2 175 aaKnown RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 DIAPH3Q9NSV4 1193 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 SPATA6Q9NWH7 488 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 ZSCAN32Q9NX65 697 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 ZFP37Q9Y6Q3 630 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-229ENST00000554672 CACNA1GO43497 2377 aa5.44□□□□□ -1.54
ATXN3-229ENST00000554672 TPRP12270 2363 aaKnown RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 SLC30A4O14863 429 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 NCAM2O15394 837 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 ZNF623O75123 536 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 OFD1O75665 1012 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 TSPAN15O95858 294 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 FOSP01100 380 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 PF4P02776 101 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 C1QTNF9P0C862 333 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 PDIA4P13667 645 aaKnown RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 DARSP14868 501 aaKnown RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 PLCG1P19174 1290 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 TPP2P29144 1249 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 ZNF76P36508 570 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 RAP1GAPP47736 663 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 HK2P52789 917 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 GPC5P78333 572 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 RNASELQ05823 741 aaKnown RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 ITGB3BPQ13352 177 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 CAMK2GQ13555 558 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 UBE2SQ16763 222 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 SLC44A4Q53GD3 710 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 NOMO2Q5JPE7 1267 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 RSPO2Q6UXX9 243 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 RALYLQ86SE5 291 aaKnown RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 CKAP2LQ8IYA6 745 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 TMTC2Q8N394 836 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 IGDCC4Q8TDY8 1250 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 CYB5D2Q8WUJ1 264 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 NELL1Q92832 810 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 RHOVQ96L33 236 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 DIRC2Q96SL1 478 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 DDX23Q9BUQ8 820 aaKnown RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 FAM126AQ9BYI3 521 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 GPR62Q9BZJ7 368 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 EPC1Q9H2F5 836 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 PLEKHA4Q9H4M7 779 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 RXFP1Q9HBX9 757 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 MAN1C1Q9NR34 630 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 NRBP2Q9NSY0 501 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 TBC1D13Q9NVG8 400 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 TMEM59LQ9UK28 342 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 GMEB2Q9UKD1 530 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 SMG5Q9UPR3 1016 aaKnown RBP5.43□□□□□ -1.54
ATXN3-229ENST00000554672 AKT3Q9Y243 479 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 FAN1Q9Y2M0 1017 aa5.43□□□□□ -1.54
ATXN3-229ENST00000554672 POLR3KQ9Y2Y1 108 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms