RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 AP5Z1O43299 807 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 NTSR2O95665 410 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 STIP1P31948 543 aaKnown RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 PRKCEQ02156 737 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 PDAP1Q13442 181 aaKnown RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 XRRA1Q6P2D8 792 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 CALML6Q8TD86 181 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 EPS8L3Q8TE67 593 aaKnown RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 SEPT1Q8WYJ6 367 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 NT5C1AQ9BXI3 368 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 C17orf75Q9HAS0 396 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 C20orf96Q9NUD7 363 aaPredicted RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 TLR2O60603 784 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 HMOX2P30519 316 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 GTF2H1P32780 548 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 CYLC2Q14093 348 aaPredicted RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 TTC23LQ6PF05 361 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 MOXD1Q6UVY6 613 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 CLEC4FQ8N1N0 589 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 RDM1Q8NG50 284 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 ANKZF1Q9H8Y5 726 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 CD248Q9HCU0 757 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 DLGAP2Q9P1A6 1054 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 SLC37A4O43826 429 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 COPAP53621 1224 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 MTMR2Q13614 643 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 PLA2G4FQ68DD2 849 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 PRR23D1E9PI22 279 aaPredicted RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 H3BQF6 201 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 ZNF197O14709 1029 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 PRR23D2P0DMB1 279 aaPredicted RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 DDX5P17844 614 aaKnown RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 TARSP26639 723 aaKnown RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 ATXN3P54252 364 aaPredicted RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 GALNT4Q8N4A0 578 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 RFWD2Q8NHY2 731 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 SMARCAD1Q9H4L7 1026 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 MAGEA13PA6NCF6 341 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 MTSS1O43312 755 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 TXNP10599 105 aaKnown RBP14.55□□□□□ -0.08
VTI1B-204ENST00000554659 BTKQ06187 659 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 ELMSAN1Q6PJG2 1045 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 RINLQ6ZS11 566 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 SCFD2Q8WU76 684 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 CYGBQ8WWM9 190 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 USP32Q8NFA0 1604 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 GPR75-ASB3A0A0A6YYF3 556 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 MUTP22033 750 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 HMGCS2P54868 508 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 COBLL1Q53SF7 1204 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 FAM71DQ8N9W8 422 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 TRIM49D1C9J1S8 452 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 TBC1D4O60343 1298 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 UBTFL6P0CB48 400 aaPredicted RBP14.55□□□□□ -0.08
VTI1B-204ENST00000554659 KPNB1Q14974 876 aaKnown RBP14.55□□□□□ -0.08
VTI1B-204ENST00000554659 KRT72Q14CN4 511 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 AASDHQ4L235 1098 aaPredicted RBP14.55□□□□□ -0.08
VTI1B-204ENST00000554659 C6orf10Q5SRN2 563 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 MEI1Q5TIA1 1274 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 IFNEQ86WN2 208 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 ARID3BQ8IVW6 561 aaPredicted RBP14.55□□□□□ -0.08
VTI1B-204ENST00000554659 PIK3R5Q8WYR1 880 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 OTUB1Q96FW1 271 aaPredicted RBP14.55□□□□□ -0.08
VTI1B-204ENST00000554659 LACRTQ9GZZ8 138 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 TJP2Q9UDY2 1190 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 CEP152O94986 1710 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 HNRNPRO43390 633 aaKnown RBP14.55□□□□□ -0.08
VTI1B-204ENST00000554659 CTCFP49711 727 aaPredicted RBP14.55□□□□□ -0.08
VTI1B-204ENST00000554659 NLRP9Q7RTR0 991 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 SH3GL2Q99962 352 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 GIMAP4Q9NUV9 329 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 GID8Q9NWU2 228 aa14.55□□□□□ -0.08
VTI1B-204ENST00000554659 APOA4P06727 396 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 DSG1Q02413 1049 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 RAD51Q06609 339 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 TBX20Q9UMR3 447 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 CPS1P31327 1500 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 NNMTP40261 264 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 PPP4CP60510 307 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 CCDC15Q0P6D6 951 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 CRYMQ14894 314 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 CENPPQ6IPU0 288 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 SNRNP27Q8WVK2 155 aaKnown RBP14.54□□□□□ -0.08
VTI1B-204ENST00000554659 SEMA6BQ9H3T3 888 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 RAB21Q9UL25 225 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 SALL3Q9BXA9 1300 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 M0R3G1 203 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 FOXN3O00409 490 aaPredicted RBP14.54□□□□□ -0.08
VTI1B-204ENST00000554659 XPO1O14980 1071 aaKnown RBP14.54□□□□□ -0.08
VTI1B-204ENST00000554659 MAGEB2O15479 319 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 GZMAP12544 262 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 SMTNL2Q2TAL5 461 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 BOLA3Q53S33 107 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 PRPF18Q99633 342 aaKnown RBP14.54□□□□□ -0.08
VTI1B-204ENST00000554659 METTL5Q9NRN9 209 aaKnown RBP14.54□□□□□ -0.08
VTI1B-204ENST00000554659 MSH4O15457 936 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 CD4P01730 458 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 CUL2Q13617 745 aa14.54□□□□□ -0.08
VTI1B-204ENST00000554659 PHF21AQ96BD5 680 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms