RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CCDC62Q6P9F0 684 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 ABHD17CQ6PCB6 329 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 BTNL9Q6UXG8 535 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 RPAINQ86UA6 219 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 MYOCDQ8IZQ8 938 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 Q8N1Y9 231 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 UBR7Q8N806 425 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 NETO2Q8NC67 525 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATXN3-228ENST00000554592 CHAC2Q8WUX2 184 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 AFG1LQ8WV93 481 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 TOP1MTQ969P6 601 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 CHMP4CQ96CF2 233 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 TSPAN17Q96FV3 270 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 YME1L1Q96TA2 773 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 KATNAL1Q9BW62 490 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 FAM126AQ9BYI3 521 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-228ENST00000554592 NACAP1Q9BZK3 213 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 RANBP17Q9H2T7 1088 aaKnown RBP5.66□□□□□ -1.5
ATXN3-228ENST00000554592 CAAP1Q9H8G2 361 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 HDAC6Q9UBN7 1215 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 FBXL7Q9UJT9 491 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 STX8Q9UNK0 236 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 PCDHA2Q9Y5H9 948 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 MYH1P12882 1939 aa5.66□□□□□ -1.5
ATXN3-228ENST00000554592 FOCADQ5VW36 1801 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 hCG_2014768A0A024R1R8 64 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 A0A1W2PQJ5 194 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 RSPH10B2B2RC85 870 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 PROB1E7EW31 1015 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 C5orf67F2Z3F1 127 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 RNF113AO15541 343 aaKnown RBP5.65□□□□□ -1.5
ATXN3-228ENST00000554592 PPFIA4O75335 1185 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 ARIH2O95376 493 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 EYA4O95677 639 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 MMP3P08254 477 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 RSPH10BP0C881 870 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 POU3F2P20265 443 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-228ENST00000554592 IBSPP21815 317 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-228ENST00000554592 AVPR2P30518 371 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 IGFALSP35858 605 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 BMPR1AP36894 532 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 RPS6P62753 249 aaKnown RBP5.65□□□□□ -1.5
ATXN3-228ENST00000554592 DLX2Q07687 328 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-228ENST00000554592 ARHGAP1Q07960 439 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 HYAL1Q12794 435 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 ADAM15Q13444 863 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 CLUL1Q15846 466 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 SYDE2Q5VT97 1194 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 SEPT14Q6ZU15 432 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 TTLL10Q6ZVT0 673 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 MTDHQ86UE4 582 aaKnown RBP5.65□□□□□ -1.5
ATXN3-228ENST00000554592 CLEC4DQ8WXI8 215 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 SEPT8Q92599 483 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 IL17RAQ96F46 866 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 ALG1Q9BT22 464 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 C11orf84Q9BUA3 381 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-228ENST00000554592 MAF1Q9H063 256 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 CD207Q9UJ71 328 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 MAPRE3Q9UPY8 281 aa5.65□□□□□ -1.5
ATXN3-228ENST00000554592 ZNFX1Q9P2E3 1918 aaKnown RBP5.65□□□□□ -1.51
ATXN3-228ENST00000554592 LOC730098B7Z3J9 87 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 HAS3O00219 553 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 GPAA1O43292 621 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 FUCA1P04066 466 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 NTRK1P04629 796 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 ASGR2P07307 311 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 ZFYP08048 801 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-228ENST00000554592 JMJD7P0C870 316 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 SLC16A2P36021 539 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 THPOP40225 353 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 NOVP48745 357 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 IGBP1P78318 339 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 PPARAQ07869 468 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 SIGLEC14Q08ET2 396 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 PCBP1Q15365 356 aaKnown RBP eCLIP5.64□□□□□ -1.51
ATXN3-228ENST00000554592 STXBP2Q15833 593 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 LY6KQ17RY6 165 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 KIAA0753Q2KHM9 967 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 CCDC96Q2M329 555 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 TCERG1LQ5VWI1 586 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 WWC2Q6AWC2 1192 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 SLC30A10Q6XR72 485 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 CHST3Q7LGC8 479 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 PPM1KQ8N3J5 372 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 KBTBD3Q8NAB2 608 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 TP53I13Q8NBR0 393 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-228ENST00000554592 PCDH19Q8TAB3 1148 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 NSUN6Q8TEA1 469 aaKnown RBP5.64□□□□□ -1.51
ATXN3-228ENST00000554592 PPP2R3CQ969Q6 453 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 KCNC2Q96PR1 638 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 IWS1Q96ST2 819 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 RNF38Q9H0F5 515 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 BCAS3Q9H6U6 928 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 ALG13Q9NP73 1137 aaKnown RBP5.64□□□□□ -1.51
ATXN3-228ENST00000554592 IL17RBQ9NRM6 502 aa5.64□□□□□ -1.51
ATXN3-228ENST00000554592 PPARGC1AQ9UBK2 798 aaKnown RBP5.64□□□□□ -1.51
ATXN3-228ENST00000554592 TIMM13Q9Y5L4 95 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-228ENST00000554592 PLIN4Q96Q06 1357 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms