RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 DNALI1O14645 258 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 SUN1O94901 812 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 PRKCBP05771 671 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 GAD2Q05329 585 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 ENPEPQ07075 957 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 XRCC4Q13426 336 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 SPATA21Q7Z572 469 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 EMC1Q8N766 993 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 MRPL4Q9BYD3 311 aaKnown RBP16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 NIFKQ9BYG3 293 aaKnown RBP16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 NIF3L1Q9GZT8 377 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 CHUKO15111 745 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 B4GALT5O43286 388 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 DNAJC8O75937 253 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 PGK2P07205 417 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 PSMA2P25787 234 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 CDH8P55286 799 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 ELF3P78545 371 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 LACTBP83111 547 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 LAMTOR4Q0VGL1 99 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 STAT4Q14765 748 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 DUOXA2Q1HG44 320 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 EAPPQ56P03 285 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 SYCP2LQ5T4T6 812 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 DENND1BQ6P3S1 775 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 WDTC1Q8N5D0 677 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 PCSK1NQ9UHG2 260 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 SLC12A4Q9UP95 1085 aa16.55■□□□□ 0.24
ARHGEF40-203ENST00000554514 INO80B-WBP1J3KQ70 363 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 MSCO60682 206 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 TOM1L1O75674 476 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 ZNF132P52740 706 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 PDIA2Q13087 525 aaKnown RBP16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 FAM160B1Q5W0V3 765 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 ARHGEF18Q6ZSZ5 1173 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 FAM228AQ86W67 206 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 WDR49Q8IV35 697 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 SPOCK2Q92563 424 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 INO80BQ9C086 356 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 SYNCQ9H7C4 482 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 ECT2Q9H8V3 914 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 SOWAHBA6NEL2 793 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 PIK3R2O00459 728 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 ATP2A1O14983 1001 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 FOXN2P32314 431 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 RFC1P35251 1148 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 RFC5P40937 340 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 KCNJ2P63252 427 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 PKN2Q16513 984 aaKnown RBP16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 POTEAQ6S8J7 498 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 ALLCQ8N6M5 410 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 JOSD2Q8TAC2 188 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 RMDN2Q96LZ7 410 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 CFAP57Q96MR6 1250 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 TMEM134Q9H6X4 195 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 CNTN6Q9UQ52 1028 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 CEP83Q9Y592 693 aa16.54■□□□□ 0.24
ARHGEF40-203ENST00000554514 hCG_1818297A0A087WSY0 165 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 LMNB2Q03252 620 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 MAPK6Q16659 721 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 HSDL1Q3SXM5 330 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 WDR78Q5VTH9 848 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 TMEM192Q8IY95 271 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 TRIM33Q9UPN9 1127 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 NOP56O00567 594 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 ICAM3P32942 547 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 DNAJC3Q13217 504 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 TARBP2Q15633 366 aaKnown RBP16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 WDR72Q3MJ13 1102 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 STK38LQ9Y2H1 464 aa16.53■□□□□ 0.24
ARHGEF40-203ENST00000554514 OGTO15294 1046 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 MAFO75444 373 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 ARIH2O95376 493 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 NRLP54845 237 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 GDF10P55107 478 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 EFTUD2Q15029 972 aaKnown RBP eCLIP16.52■□□□□ 0.241e-6■■□□□ 14.2
ARHGEF40-203ENST00000554514 SGSM1Q2NKQ1 1148 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 PTPN20Q4JDL3 420 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 APOBEC3FQ8IUX4 373 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 ZBTB8OSQ8IWT0 167 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 SEPT1Q8WYJ6 367 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 FAM189A1O60320 539 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 OAS1P00973 400 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 CD48P09326 243 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 GCAP28676 217 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 VCPP55072 806 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 WDR4P57081 412 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 PSMC1P62191 440 aaKnown RBP16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 IGBP1P78318 339 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 CGB2Q6NT52 195 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 UBR7Q8N806 425 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 CHST13Q8NET6 341 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 PITPNM3Q9BZ71 974 aa16.52■□□□□ 0.24
ARHGEF40-203ENST00000554514 TRABDQ9H4I3 376 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms