RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 NPAS3Q8IXF0 933 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 FMR1NBQ8N0W7 255 aaPredicted RBP8.1□□□□□ -1.11
LINC00640-201ENST00000554409 THEM5Q8N1Q8 247 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 ELMOD1Q8N336 334 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 CSGALNACT2Q8N6G5 542 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 TOP6BLQ8N6T0 577 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 OR5B17Q8NGF7 314 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 OR10T2Q8NGX3 314 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 ITFG1Q8TB96 612 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 NOC3LQ8WTT2 800 aaKnown RBP8.1□□□□□ -1.11
LINC00640-201ENST00000554409 FGF13Q92913 245 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 CCDC47Q96A33 483 aaKnown RBP8.1□□□□□ -1.11
LINC00640-201ENST00000554409 PBXIP1Q96AQ6 731 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 CCDC34Q96HJ3 373 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 TMEM209Q96SK2 561 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 CGRRF1Q99675 332 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
LINC00640-201ENST00000554409 SMOC2Q9H3U7 446 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 DMAC2Q9NW81 257 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 GDE1Q9NZC3 331 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 CEP72Q9P209 647 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 RABGEF1Q9UJ41 708 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 OBSL1O75147 1896 aa8.1□□□□□ -1.11
LINC00640-201ENST00000554409 NUP210Q8TEM1 1887 aaPredicted RBP8.1□□□□□ -1.11
LINC00640-201ENST00000554409 DENND4CQ5VZ89 1909 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 ZNF197O14709 1029 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 GABRDO14764 452 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 EXOC3O60645 756 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 HUS1O60921 280 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 KIF20AO95235 890 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 STAU1O95793 577 aaKnown RBP8.09□□□□□ -1.11
LINC00640-201ENST00000554409 KRT19P08727 400 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 SRFP11831 508 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 TNNI1P19237 187 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 EPHB3P54753 998 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 CLDN10P78369 228 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 BFSP1Q12934 665 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 MYO1EQ12965 1108 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 DUSP4Q13115 394 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 SLC39A12Q504Y0 691 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 LMBRD2Q68DH5 695 aaPredicted RBP8.09□□□□□ -1.11
LINC00640-201ENST00000554409 SCARA3Q6AZY7 606 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 IQCEQ6IPM2 695 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 SUGP1Q8IWZ8 645 aaKnown RBP8.09□□□□□ -1.11
LINC00640-201ENST00000554409 DCP1BQ8IZD4 617 aaKnown RBP8.09□□□□□ -1.11
LINC00640-201ENST00000554409 PDCL2Q8N4E4 241 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 SLC44A3Q8N4M1 653 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 ENGASEQ8NFI3 743 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 SPPL2BQ8TCT7 592 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 RSAD2Q8WXG1 361 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 FAM84AQ96KN4 292 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 ZNF512Q96ME7 567 aaPredicted RBP8.09□□□□□ -1.11
LINC00640-201ENST00000554409 PGLYRP2Q96PD5 576 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 FNBP1Q96RU3 617 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 ACBD6Q9BR61 282 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 CORO1BQ9BR76 489 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 LRRC3Q9BY71 257 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 DNAJC25Q9H1X3 360 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 CRISPLD1Q9H336 500 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 ASAH2Q9NR71 780 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 SLC2A4RGQ9NR83 387 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 WNT16Q9UBV4 365 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 L1RE1Q9UN81 338 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 TRAF3IP3Q9Y228 551 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 MRPS23Q9Y3D9 190 aaKnown RBP8.09□□□□□ -1.11
LINC00640-201ENST00000554409 ASB3Q9Y575 518 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 NUMBLQ9Y6R0 609 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 PTPRDP23468 1912 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 COL4A2P08572 1712 aa8.09□□□□□ -1.11
LINC00640-201ENST00000554409 GOLGA6L4A6NEF3 574 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 MAPK13O15264 365 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 NARSO43776 548 aaKnown RBP8.08□□□□□ -1.12
LINC00640-201ENST00000554409 MOSPD3O75425 235 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 ECI2O75521 394 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 FGF19O95750 216 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 FAM163BP0C2L3 166 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 DLATP10515 647 aaKnown RBP8.08□□□□□ -1.12
LINC00640-201ENST00000554409 CEBPBP17676 345 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 CCR2P41597 374 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 ALDH1A3P47895 512 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 LHX1P48742 406 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 TUFMP49411 452 aaKnown RBP8.08□□□□□ -1.12
LINC00640-201ENST00000554409 AP3M2P53677 418 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 MYL7Q01449 175 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 TSPY1Q01534 308 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 FAM160A1Q05DH4 1040 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 SNW1Q13573 536 aaKnown RBP8.08□□□□□ -1.12
LINC00640-201ENST00000554409 SOWAHAQ2M3V2 549 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 CYP4A22Q5TCH4 519 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 PARM1Q6UWI2 310 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 PDZD4Q76G19 769 aaPredicted RBP8.08□□□□□ -1.12
LINC00640-201ENST00000554409 TRAPPC11Q7Z392 1133 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 ITIH5Q86UX2 942 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 LRRTM3Q86VH5 581 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 PACS2Q86VP3 889 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 TMC8Q8IU68 726 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 ADGRF2Q8IZF7 708 aa8.08□□□□□ -1.12
LINC00640-201ENST00000554409 GUF1Q8N442 669 aaKnown RBP8.08□□□□□ -1.12
LINC00640-201ENST00000554409 TTC9BQ8N6N2 239 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms