RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ATP11BQ9Y2G3 1177 aa6.25□□□□□ -1.41
CHD8-207ENST00000554384 MYO1CO00159 1063 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 FGF18O76093 207 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 PPM1AP35813 382 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 ZNF134P52741 427 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 MAPK10P53779 464 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 PLP2Q04941 152 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 RAB32Q13637 225 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 AMOTQ4VCS5 1084 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 GGT6Q6P531 493 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 LRRC55Q6ZSA7 311 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 PALM2Q8IXS6 379 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 Q8NA96 180 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 PSD4Q8NDX1 1056 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 CXorf38Q8TB03 319 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 C8orf49Q96NF6 230 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 PNKPQ96T60 521 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 CNPPD1Q9BV87 410 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 PPCSQ9HAB8 311 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 A1CFQ9NQ94 594 aaKnown RBP6.24□□□□□ -1.41
CHD8-207ENST00000554384 HESX1Q9UBX0 185 aa6.24□□□□□ -1.41
CHD8-207ENST00000554384 A0A1W2PPC4 97 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 RASSF9O75901 435 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 SUN1O94901 812 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 CHEK2O96017 543 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 FGFR2P21802 821 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 TCF15Q12870 199 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 TRIM14Q14142 442 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 ARL13BQ3SXY8 428 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 ZIK1Q3SY52 487 aaPredicted RBP6.23□□□□□ -1.41
CHD8-207ENST00000554384 TUBB8Q3ZCM7 444 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 HS1BP3Q53T59 392 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 B3GNTL1Q67FW5 361 aaPredicted RBP6.23□□□□□ -1.41
CHD8-207ENST00000554384 ERAP2Q6P179 960 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 GDF7Q7Z4P5 450 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 KCTD20Q7Z5Y7 419 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 GGNQ86UU5 652 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 MAPKAPK5Q8IW41 473 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 TXLNBQ8N3L3 684 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 EDAQ92838 391 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 DDX17Q92841 729 aaKnown RBP6.23□□□□□ -1.41
CHD8-207ENST00000554384 EXTL1Q92935 676 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 C18orf8Q96DM3 657 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 SMOQ99835 787 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 WDR12Q9GZL7 423 aaKnown RBP6.23□□□□□ -1.41
CHD8-207ENST00000554384 HDAC9Q9UKV0 1011 aa6.23□□□□□ -1.41
CHD8-207ENST00000554384 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 PLEKHD1A6NEE1 506 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 H7C4K7 107 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 hCG_1984214I3L0E3 225 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 FOXN3O00409 490 aaPredicted RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 CYP27B1O15528 508 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 NCR1O76036 304 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 GPANK1O95872 356 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 SPATA31D3P0C874 917 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 ZFP36P26651 326 aaKnown RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 HSPA7P48741 367 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 CARSP49589 748 aaKnown RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 ITGA8P53708 1063 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 LILRA4P59901 499 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 POU6F2P78424 691 aaPredicted RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 ZNF844Q08AG5 666 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 TOB2Q14106 344 aaPredicted RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 SLC35G1Q2M3R5 365 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 CD300EQ496F6 205 aaPredicted RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 LONRF3Q496Y0 759 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 SPATA31D4Q6ZUB0 917 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 PRRT2Q7Z6L0 340 aaPredicted RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 CHST13Q8NET6 341 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 NACC2Q96BF6 587 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 IQCDQ96DY2 449 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 LRRC46Q96FV0 321 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 REXO4Q9GZR2 422 aaKnown RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 KLC2Q9H0B6 622 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 RNPEPQ9H4A4 650 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 TRMT13Q9NUP7 481 aaKnown RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 MID2Q9UJV3 735 aa6.22□□□□□ -1.41
CHD8-207ENST00000554384 MRPS17Q9Y2R5 130 aaKnown RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 MTO1Q9Y2Z2 717 aaKnown RBP6.22□□□□□ -1.41
CHD8-207ENST00000554384 CCDC195A0A1B0GUA6 201 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 K7ESM1 405 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 RAB27BO00194 218 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 ERN1O75460 977 aaKnown RBP6.21□□□□□ -1.42
CHD8-207ENST00000554384 ANXA2P07355 339 aaKnown RBP6.21□□□□□ -1.42
CHD8-207ENST00000554384 TXNP10599 105 aaKnown RBP6.21□□□□□ -1.42
CHD8-207ENST00000554384 NR4A1P22736 598 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 GCLCP48506 637 aaPredicted RBP6.21□□□□□ -1.42
CHD8-207ENST00000554384 SLC25A3Q00325 362 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 PIGFQ07326 219 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 R3HDM1Q15032 1099 aaKnown RBP6.21□□□□□ -1.42
CHD8-207ENST00000554384 GEN1Q17RS7 908 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 MPEG1Q2M385 716 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 SLC44A4Q53GD3 710 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 PLA1AQ53H76 456 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 RABL3Q5HYI8 236 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 DGKKQ5KSL6 1271 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 GORABQ5T7V8 394 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 RNF44Q7L0R7 432 aa6.21□□□□□ -1.42
CHD8-207ENST00000554384 TMEM132CQ8N3T6 1108 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms