RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 GRIK3Q13003 919 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PPP2R5CQ13362 524 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TDGQ13569 410 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SETDB1Q15047 1291 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PON2Q15165 354 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DUOXA2Q1HG44 320 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DENND2CQ68D51 928 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DCLRE1AQ6PJP8 1040 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SASS6Q6UVJ0 657 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TMEM92Q6UXU6 159 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ANKS3Q6ZW76 656 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DNAJB7Q7Z6W7 309 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CMTR2Q8IYT2 770 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SLC39A11Q8N1S5 342 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 C12orf29Q8N999 325 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NETO2Q8NC67 525 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 BCL7CQ8WUZ0 217 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NDRG1Q92597 394 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 GOLGA1Q92805 767 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 FGF14Q92915 247 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NKD2Q969F2 451 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ZMAT2Q96NC0 199 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SLITRK1Q96PX8 696 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 HHIPQ96QV1 700 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PHOX2BQ99453 314 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TNMDQ9H2S6 317 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ADAMTS10Q9H324 1103 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PDZD7Q9H5P4 517 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TBC1D17Q9HA65 648 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TUFT1Q9NNX1 390 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NLRC4Q9NPP4 1024 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 RASAL2Q9UJF2 1139 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 FBXL5Q9UKA1 691 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 VAV3Q9UKW4 847 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 USTQ9Y2C2 406 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PIAS3Q9Y6X2 628 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DNAJC13O75165 2243 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ABCA12Q86UK0 2595 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 LRRC37AA6NMS7 1700 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PHIPQ8WWQ0 1821 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TTC3P53804 2025 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MYBPHLA2RUH7 354 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MBLAC1A4D2B0 266 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM49BA6NDI0 452 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 KPNA7A9QM74 516 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 DCLK1O15075 740 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NCAM2O15394 837 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CREB3O43889 395 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CLASP2O75122 1294 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 AP1G2O75843 785 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF202O95125 648 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SOD2P04179 222 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CTSAP10619 480 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 EPB41P11171 864 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PFKFB1P16118 471 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PSEN1P49768 467 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NDUFA8P51970 172 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SPEM2Q0P670 501 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 COASYQ13057 564 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NME3Q13232 169 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM71Q2Q1W2 868 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TSGA10IPQ3SY00 556 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 AASDHQ4L235 1098 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 NT5DC1Q5TFE4 455 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TANGO2Q6ICL3 276 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SYCE2Q6PIF2 218 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 LEKR1Q6ZMV7 388 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 RNF19BQ6ZMZ0 732 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CACNA2D4Q7Z3S7 1137 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 FRMD5Q7Z6J6 570 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PPFIBP1Q86W92 1011 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ADGRF2Q8IZF7 708 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SIX6OS1Q8N1H7 587 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SAMD3Q8N6K7 520 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SMG8Q8ND04 991 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PDCD6IPQ8WUM4 868 aaKnown RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 RAD54LQ92698 747 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SAMD11Q96NU1 681 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SPAG5Q96R06 1193 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MYADMQ96S97 322 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TSPAN18Q96SJ8 248 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 VPS16Q9H269 839 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 EPC1Q9H2F5 836 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CLSTN2Q9H4D0 955 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ZSCAN16Q9H4T2 348 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-205ENST00000554081 KCNMB3Q9NPA1 279 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ARHGEF3Q9NR81 526 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 HSPBP1Q9NZL4 362 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 TRPM5Q9NZQ8 1165 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SLC8A2Q9UPR5 921 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 SORCS3Q9UPU3 1222 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 CTNND2Q9UQB3 1225 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MTMR6Q9Y217 621 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 GIT1Q9Y2X7 761 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 PCDHB4Q9Y5E5 795 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 MYH8P13535 1937 aa2.68□□□□□ -1.98
PRPF39-205ENST00000554081 ATXN2Q99700 1313 aaKnown RBP2.67□□□□□ -1.98
PRPF39-205ENST00000554081 SCN5AQ14524 2016 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms