RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 GOLGA6L9A6NEM1 432 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 USP27XA6NNY8 438 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 F8W810 466 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 I3L4J1 428 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 GABRDO14764 452 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 NRP1O14786 923 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 MED7O43513 233 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 TRAPPC3O43617 180 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 TADA2AO75478 443 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 CYP11A1P05108 521 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 GALTP07902 379 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 VDRP11473 427 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 GZMAP12544 262 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 LHX1P48742 406 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 SLC11A1P49279 550 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 VAV2P52735 878 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 ORC1Q13415 861 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 SGO2Q562F6 1265 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 TMCO2Q7Z6W1 182 aaPredicted RBP12.51□□□□□ -0.41
NEK9-202ENST00000553823 OSTM1Q86WC4 334 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 METTL23Q86XA0 190 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 REXO1L1PQ8IX06 675 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 CMTR2Q8IYT2 770 aaKnown RBP12.51□□□□□ -0.41
NEK9-202ENST00000553823 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 HERVK_113Q902F9 699 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 TFAP2BQ92481 460 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 PPP1R13BQ96KQ4 1090 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 PCDHB18PQ96TA0 734 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 RC3H2Q9HBD1 1191 aaKnown RBP12.51□□□□□ -0.41
NEK9-202ENST00000553823 HCSTQ9UBK5 93 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 NME7Q9Y5B8 376 aa12.51□□□□□ -0.41
NEK9-202ENST00000553823 RTN2O75298 545 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 CYP1A1P04798 512 aaPredicted RBP12.5□□□□□ -0.41
NEK9-202ENST00000553823 PDGFRBP09619 1106 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 TYMPP19971 482 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 LMO2P25791 158 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 ALDH7A1P49419 539 aaKnown RBP12.5□□□□□ -0.41
NEK9-202ENST00000553823 BCAR1P56945 870 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 BTG3Q14201 252 aaPredicted RBP12.5□□□□□ -0.41
NEK9-202ENST00000553823 STILQ15468 1287 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 CLEC16AQ2KHT3 1053 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 ZNF662Q6ZS27 426 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 ACOT1Q86TX2 421 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 CRYBG2Q8N1P7 616 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 YME1L1Q96TA2 773 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 ZSWIM1Q9BR11 485 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 CWH43Q9H720 699 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 MARCH5Q9NX47 278 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 DDX43Q9NXZ2 648 aaKnown RBP12.5□□□□□ -0.41
NEK9-202ENST00000553823 ADAM28Q9UKQ2 775 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 PCDHGC3Q9UN70 934 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 TIMM13Q9Y5L4 95 aaPredicted RBP12.5□□□□□ -0.41
NEK9-202ENST00000553823 ATP8B3O60423 1300 aa12.5□□□□□ -0.41
NEK9-202ENST00000553823 RCCD1A6NED2 376 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 TMCO5BA8MYB1 307 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 O00370 1275 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 SYN3O14994 580 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 PJA2O43164 708 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 HCRTO43612 131 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 ZNF500O60304 480 aaPredicted RBP12.49□□□□□ -0.41
NEK9-202ENST00000553823 GJB5O95377 273 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 CFHP08603 1231 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 H2AFZP0C0S5 128 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 UNGP13051 313 aaPredicted RBP12.49□□□□□ -0.41
NEK9-202ENST00000553823 PCSK1P29120 753 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 SSTR3P32745 418 aaPredicted RBP12.49□□□□□ -0.41
NEK9-202ENST00000553823 KIF5AQ12840 1032 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 ELAVL2Q12926 359 aaKnown RBP12.49□□□□□ -0.41
NEK9-202ENST00000553823 CNGA2Q16280 664 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 ARHGAP29Q52LW3 1261 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 SPOUT1Q5T280 376 aaKnown RBP12.49□□□□□ -0.41
NEK9-202ENST00000553823 H2AFVQ71UI9 128 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 C12orf29Q8N999 325 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 CYFIP2Q96F07 1278 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 TSGA10Q9BZW7 698 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 ISCUQ9H1K1 167 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 MTIF3Q9H2K0 278 aaKnown RBP12.49□□□□□ -0.41
NEK9-202ENST00000553823 DPEP3Q9H4B8 488 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 TAS2R14Q9NYV8 317 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 CXXC1Q9P0U4 656 aaPredicted RBP12.49□□□□□ -0.41
NEK9-202ENST00000553823 INTUQ9ULD6 942 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 NR2E3Q9Y5X4 410 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 SLC4A7Q9Y6M7 1214 aa12.49□□□□□ -0.41
NEK9-202ENST00000553823 SF3B1O75533 1304 aaKnown RBP eCLIP12.48□□□□□ -0.41
NEK9-202ENST00000553823 A0A0U1RQJ8 604 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 CARNS1A5YM72 827 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 NT5C1B-RDH14C9J2C7 533 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 KRT86O43790 486 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 MICAL2O94851 1124 aa12.48□□□□□ -0.41
NEK9-202ENST00000553823 LSM8O95777 96 aaKnown RBP12.48□□□□□ -0.41
NEK9-202ENST00000553823 FTLP02792 175 aaPredicted RBP12.48□□□□□ -0.41
NEK9-202ENST00000553823 PTPN1P18031 435 aaKnown RBP12.48□□□□□ -0.41
NEK9-202ENST00000553823 CDH5P33151 784 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms