RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.4□□□□□ -0.74
CHD8-204ENST00000553622 TAS1R1Q7RTX1 841 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 IRF2BP2Q7Z5L9 587 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 NOP9Q86U38 636 aaKnown RBP10.4□□□□□ -0.74
CHD8-204ENST00000553622 VPS36Q86VN1 386 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 UNC93AQ86WB7 457 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 TMTC1Q8IUR5 882 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 SLC4A11Q8NBS3 891 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.74
CHD8-204ENST00000553622 WHAMMQ8TF30 809 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 CCDC42Q96M95 316 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 LPIN3Q9BQK8 851 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 SYT15Q9BQS2 421 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 MED10Q9BTT4 135 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 NHEJ1Q9H9Q4 299 aaPredicted RBP10.4□□□□□ -0.74
CHD8-204ENST00000553622 FAM49BQ9NUQ9 324 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 MSRAQ9UJ68 235 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 STXBP5LQ9Y2K9 1186 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 PCDHA11Q9Y5I1 949 aa10.4□□□□□ -0.74
CHD8-204ENST00000553622 BZW2Q9Y6E2 419 aaKnown RBP10.4□□□□□ -0.74
CHD8-204ENST00000553622 PLXNA3P51805 1871 aa10.4□□□□□ -0.75
CHD8-204ENST00000553622 MTCL1Q9Y4B5 1905 aaKnown RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 LINC01553A4QN01 128 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 MED7O43513 233 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 ATP2C2O75185 946 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 FGF18O76093 207 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 CYP11A1P05108 521 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 MMEP08473 750 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 PAEPP09466 180 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 ADORA2BP29275 332 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 HNRNPH3P31942 346 aaKnown RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 PBX2P40425 430 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 RGS19P49795 217 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 ZNF132P52740 706 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 TSPY1Q01534 308 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 CYP27A1Q02318 531 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 MEA1Q16626 185 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 USP41Q3LFD5 358 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 SGO2Q562F6 1265 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 MDH1BQ5I0G3 518 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 ZNF280DQ6N043 979 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 PRSS55Q6UWB4 352 aaPredicted RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 ZNF571Q7Z3V5 609 aaPredicted RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 PASD1Q8IV76 773 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 GLYCTKQ8IVS8 523 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 TDHQ8IZJ6 230 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 VPS52Q8N1B4 723 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 C12orf29Q8N999 325 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 KLHL23Q8NBE8 558 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 B3GALNT2Q8NCR0 500 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 EPS8L1Q8TE68 723 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 RIN2Q8WYP3 895 aaPredicted RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 TNIP3Q96KP6 325 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 AGPAT1Q99943 283 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 C17orf80Q9BSJ5 609 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 TTPALQ9BTX7 342 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 VN1R3Q9BXE9 311 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 NKX2-4Q9H2Z4 354 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 KCNF1Q9H3M0 494 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 FAM124BQ9H5Z6 455 aaPredicted RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 CERS4Q9HA82 394 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 ARHGAP20Q9P2F6 1191 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 CDH9Q9ULB4 789 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 CNTN6Q9UQ52 1028 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 YBX2Q9Y2T7 364 aaKnown RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 RWDD3Q9Y3V2 267 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 NME7Q9Y5B8 376 aa10.39□□□□□ -0.75
CHD8-204ENST00000553622 ZNF638Q14966 1978 aaKnown RBP10.39□□□□□ -0.75
CHD8-204ENST00000553622 TNRC18O15417 2968 aaPredicted RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 COL4A4P53420 1690 aaPredicted RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 PATJQ8NI35 1801 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 TMCO5BA8MYB1 307 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 H7C4K7 107 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 M0QYV0 167 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 GABRDO14764 452 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 ARHGEF15O94989 841 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 IPO7O95373 1038 aaKnown RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 SOD2P04179 222 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 URODP06132 367 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 FAM163BP0C2L3 166 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 OR4Q2P0C623 313 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 VDRP11473 427 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 CCDC130P13994 396 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 PTPN1P18031 435 aaKnown RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 FGFR3P22607 806 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 CYLC1P35663 651 aaPredicted RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 BMPR1AP36894 532 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 PRKCIP41743 596 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 GLUD2P49448 558 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 KIF11P52732 1056 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 CCZ1BP86790 482 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 CCZ1P86791 482 aaPredicted RBP10.38□□□□□ -0.75
CHD8-204ENST00000553622 CDK17Q00537 523 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 CDR2Q01850 454 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 MTF1Q14872 753 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 RAB30Q15771 203 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 PSMD5Q16401 504 aa10.38□□□□□ -0.75
CHD8-204ENST00000553622 CCDC142Q17RM4 750 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms