RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 PDGFRBP09619 1106 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 TNNT1P13805 278 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 LMO2P25791 158 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 BRCC3P46736 316 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 OR1G1P47890 313 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 NOMO3P69849 1222 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 CNGA2Q16280 664 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 PAN2Q504Q3 1202 aaKnown RBP14.62□□□□□ -0.07
APEX1-205ENST00000553555 SGO2Q562F6 1265 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 ACOT1Q86TX2 421 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 PCDH10Q9P2E7 1040 aa14.62□□□□□ -0.07
APEX1-205ENST00000553555 VWA8A3KMH1 1905 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 F8W810 466 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 HCRTO43612 131 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 KIF5CO60282 957 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 DGKIO75912 1065 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 BAIAP3O94812 1187 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 KIF4AO95239 1232 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 AMHP03971 560 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 ITGB1P05556 798 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 TMEM253P0C7T8 217 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 ETF1P62495 437 aaKnown RBP14.61□□□□□ -0.07
APEX1-205ENST00000553555 CENPCQ03188 943 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 PPIGQ13427 754 aaKnown RBP eCLIP14.61□□□□□ -0.074e-7■□□□□ 10.1
APEX1-205ENST00000553555 DNTTIP2Q5QJE6 756 aaKnown RBP14.61□□□□□ -0.07
APEX1-205ENST00000553555 C16orf59Q7L2K0 433 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 PASD1Q8IV76 773 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 HASPINQ8TF76 798 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 CPA5Q8WXQ8 436 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 BADQ92934 168 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 SUSD3Q96L08 255 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 MYO1AQ9UBC5 1043 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 SALL4Q9UJQ4 1053 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 PAXBP1Q9Y5B6 917 aa14.61□□□□□ -0.07
APEX1-205ENST00000553555 COL4A6Q14031 1691 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 FAM170AA1A519 330 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 I3L4J1 428 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 O00370 1275 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 NRP1O14786 923 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 LSM8O95777 96 aaKnown RBP14.6□□□□□ -0.07
APEX1-205ENST00000553555 ALDH2P05091 517 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 CYP11A1P05108 521 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 ODC1P11926 461 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 ABCB4P21439 1286 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 CDH5P33151 784 aaPredicted RBP14.6□□□□□ -0.07
APEX1-205ENST00000553555 LHX1P48742 406 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 GNG11P61952 73 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 WDR5P61964 334 aaKnown RBP14.6□□□□□ -0.07
APEX1-205ENST00000553555 DEFB103AP81534 67 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 STILQ15468 1287 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 NAA35Q5VZE5 725 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 PPP1R2P3Q6NXS1 205 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 LCLAT1Q6UWP7 414 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 C7orf61Q8IZ16 206 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 WDTC1Q8N5D0 677 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 RNF10Q8N5U6 811 aaKnown RBP14.6□□□□□ -0.07
APEX1-205ENST00000553555 C12orf29Q8N999 325 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 TMEM35BQ8NCS4 154 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 SPATA18Q8TC71 538 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 CTNNBL1Q8WYA6 563 aaPredicted RBP14.6□□□□□ -0.07
APEX1-205ENST00000553555 SECISBP2LQ93073 1101 aaKnown RBP14.6□□□□□ -0.07
APEX1-205ENST00000553555 TMEM175Q9BSA9 504 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 ZNF518BQ9C0D4 1074 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 DNAI2Q9GZS0 605 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 THAP2Q9H0W7 228 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 LHX5Q9H2C1 402 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 DPEP3Q9H4B8 488 aa14.6□□□□□ -0.07
APEX1-205ENST00000553555 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.6□□□□□ -0.07
APEX1-205ENST00000553555 TIMM13Q9Y5L4 95 aaPredicted RBP14.6□□□□□ -0.07
APEX1-205ENST00000553555 A0A0A6YYK5 440 aaPredicted RBP14.59□□□□□ -0.07
APEX1-205ENST00000553555 ARHGEF37A1IGU5 675 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 MACROD2A1Z1Q3 448 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 NSFP46459 744 aaKnown RBP14.59□□□□□ -0.07
APEX1-205ENST00000553555 GPC5P78333 572 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 FPGSQ05932 587 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 ZNF569Q5MCW4 686 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 PPP1R26Q5T8A7 1209 aaPredicted RBP14.59□□□□□ -0.07
APEX1-205ENST00000553555 ARHGAP17Q68EM7 881 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 DENND1BQ6P3S1 775 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 SYT10Q6XYQ8 523 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 PHF13Q86YI8 300 aaPredicted RBP14.59□□□□□ -0.07
APEX1-205ENST00000553555 MCOLN2Q8IZK6 566 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 ZNF689Q96CS4 500 aaPredicted RBP14.59□□□□□ -0.07
APEX1-205ENST00000553555 ARHGEF26Q96DR7 871 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 TNIP3Q96KP6 325 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 LPIN3Q9BQK8 851 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 COLEC11Q9BWP8 271 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 DDX43Q9NXZ2 648 aaKnown RBP14.59□□□□□ -0.07
APEX1-205ENST00000553555 HCSTQ9UBK5 93 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 DSEQ9UL01 958 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 PCDHB8Q9UN66 801 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 FAN1Q9Y2M0 1017 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 PRG3Q9Y2Y8 225 aaPredicted RBP14.59□□□□□ -0.07
APEX1-205ENST00000553555 NCANO14594 1321 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 TADA2AO75478 443 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 MICAL2O94851 1124 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 FGBP02675 491 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 GALTP07902 379 aa14.59□□□□□ -0.07
APEX1-205ENST00000553555 TYMPP19971 482 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms