RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ZNF653Q96CK0 615 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 ARHGEF26Q96DR7 871 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 SCLT1Q96NL6 688 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 PNKPQ96T60 521 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 ZSWIM1Q9BR11 485 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 PI4K2AQ9BTU6 479 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 FUT8Q9BYC5 575 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 BCO2Q9BYV7 579 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 FAM129AQ9BZQ8 928 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 MTMR12Q9C0I1 747 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 XYLT2Q9H1B5 865 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 LHX5Q9H2C1 402 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 ADAMTS10Q9H324 1103 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 APOBEC3GQ9HC16 384 aaKnown RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 OSGEPQ9NPF4 335 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 NMRK2Q9NPI5 230 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 MED4Q9NPJ6 270 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 GDF3Q9NR23 364 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 PARVAQ9NVD7 372 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 TAS2R14Q9NYV8 317 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 CNOT8Q9UFF9 292 aaKnown RBP7.78□□□□□ -1.16
ATXN3-221ENST00000553498 GJD2Q9UKL4 321 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 MTUS1Q9ULD2 1270 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 COG5Q9UP83 839 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 NUB1Q9Y5A7 615 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 PCDHA3Q9Y5H8 950 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 ALG6Q9Y672 507 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 MROH7Q68CQ1 1323 aa7.78□□□□□ -1.16
ATXN3-221ENST00000553498 A0A1W2PRU2 124 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 GPR25O00155 361 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 MYO1FO00160 1098 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 KRIT1O00522 736 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 DDX3YO15523 660 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 B4GALT5O43286 388 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 XPOTO43592 962 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 FAM163BP0C2L3 166 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 SMIM10L2AP0DMW4 78 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 SMIM10L2BP0DMW5 78 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 DARSP14868 501 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 ATF7P17544 494 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 ARF4P18085 180 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 MMP8P22894 467 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 POLR2BP30876 1174 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 HOXC8P31273 242 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 CXCR5P32302 372 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 CETN2P41208 172 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 RNF144AP50876 292 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 CRYBB1P53674 252 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 YARSP54577 528 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 FCGRTP55899 365 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 GSCP56915 257 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 RWDD2BP57060 319 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 MYL6P60660 151 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 NOMO3P69849 1222 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 ADAM17P78536 824 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 C2orf54Q08AI8 447 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 MYO1EQ12965 1108 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 PAK2Q13177 524 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 DHX34Q14147 1143 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 TMEM132DQ14C87 1099 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 TMEM63BQ5T3F8 832 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 SEL1L2Q5TEA6 688 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 MFSD14CQ5VZR4 134 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 EEF1DP3Q658K8 133 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 LMBRD2Q68DH5 695 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 PLEKHA7Q6IQ23 1121 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 NOTUMQ6P988 496 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 FAM43BQ6ZT52 329 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 MON1BQ7L1V2 547 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 LRRC52Q8N7C0 313 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 GOLGA6L1Q8N7Z2 621 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 ADAMTS19Q8TE59 1207 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 WHAMMQ8TF30 809 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 ZNF606Q8WXB4 792 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 CD101Q93033 1021 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 CAVIN3Q969G5 261 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 RNPC3Q96LT9 517 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 NUP85Q9BW27 656 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 MINDY3Q9H8M7 445 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 SPC25Q9HBM1 224 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 POLMQ9NP87 494 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 HOMER3Q9NSC5 361 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 CISHQ9NSE2 258 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 RBM12Q9NTZ6 932 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 WDR35Q9P2L0 1181 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 NOC2LQ9Y3T9 749 aaKnown RBP7.77□□□□□ -1.17
ATXN3-221ENST00000553498 LCTP09848 1927 aa7.77□□□□□ -1.17
ATXN3-221ENST00000553498 SMCHD1A6NHR9 2005 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 C17orf102A2RUQ5 167 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 POM121CA8CG34 1229 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 LACTBL1A8MY62 500 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 FAM155AB1AL88 458 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-221ENST00000553498 PODXLO00592 558 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 THAP12O43422 761 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 WIPF1O43516 503 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 PSTPIP1O43586 416 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 SPOPO43791 374 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 GPR32O75388 356 aa7.76□□□□□ -1.17
ATXN3-221ENST00000553498 PROSCO94903 275 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms