RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 SOAT2O75908 522 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 PDGFBP01127 241 aaPredicted RBP20.7■□□□□ 0.9
PTCH1-227ENST00000553256 FAM163BP0C2L3 166 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 HAPLN1P10915 354 aaPredicted RBP20.7■□□□□ 0.9
PTCH1-227ENST00000553256 BMP6P22004 513 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 FCARP24071 287 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 ENPEPQ07075 957 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 ZACNQ401N2 412 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 INTS6LQ5JSJ4 861 aaKnown RBP20.7■□□□□ 0.9
PTCH1-227ENST00000553256 THEM5Q8N1Q8 247 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 C2orf15Q8WU43 125 aaKnown RBP20.7■□□□□ 0.9
PTCH1-227ENST00000553256 CORO1BQ9BR76 489 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 DDX43Q9NXZ2 648 aaKnown RBP20.7■□□□□ 0.9
PTCH1-227ENST00000553256 GDE1Q9NZC3 331 aa20.7■□□□□ 0.9
PTCH1-227ENST00000553256 MRPS23Q9Y3D9 190 aaKnown RBP20.7■□□□□ 0.9
PTCH1-227ENST00000553256 CALUO43852 315 aaPredicted RBP20.69■□□□□ 0.9
PTCH1-227ENST00000553256 TACC1O75410 805 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 KIF20AO95235 890 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 WARSP23381 471 aaKnown RBP20.69■□□□□ 0.9
PTCH1-227ENST00000553256 LMO2P25791 158 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 PRCPP42785 496 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 MYL6P60660 151 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 MYO1EQ12965 1108 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 EDRF1Q3B7T1 1238 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 ZNF658Q5TYW1 1059 aaPredicted RBP20.69■□□□□ 0.9
PTCH1-227ENST00000553256 ADGRF2Q8IZF7 708 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 ST13P5Q8NFI4 369 aaPredicted RBP20.69■□□□□ 0.9
PTCH1-227ENST00000553256 SHKBP1Q8TBC3 707 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 SPPL2BQ8TCT7 592 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 PSMG2Q969U7 264 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 MKNK1Q9BUB5 465 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 IL21Q9HBE4 155 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 ZNF334Q9HCZ1 680 aaPredicted RBP20.69■□□□□ 0.9
PTCH1-227ENST00000553256 CHMP5Q9NZZ3 219 aa20.69■□□□□ 0.9
PTCH1-227ENST00000553256 MYBPHLA2RUH7 354 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 GOLGA6L4A6NEF3 574 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 IKBKBO14920 756 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 NR2F2P24468 414 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 ACAT1P24752 427 aaKnown RBP20.68■□□□□ 0.9
PTCH1-227ENST00000553256 LHX1P48742 406 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 CDR1P51861 262 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 AP3M2P53677 418 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 PMS1P54277 932 aaKnown RBP20.68■□□□□ 0.9
PTCH1-227ENST00000553256 GAREM2Q75VX8 874 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 DNAJB7Q7Z6W7 309 aaPredicted RBP20.68■□□□□ 0.9
PTCH1-227ENST00000553256 ADSSL1Q8N142 457 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 LEMD2Q8NC56 503 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 ING5Q8WYH8 240 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 CCDC47Q96A33 483 aaKnown RBP20.68■□□□□ 0.9
PTCH1-227ENST00000553256 ZNF512Q96ME7 567 aaPredicted RBP20.68■□□□□ 0.9
PTCH1-227ENST00000553256 ZSWIM3Q96MP5 696 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 MRPL45Q9BRJ2 306 aaKnown RBP20.68■□□□□ 0.9
PTCH1-227ENST00000553256 CRTAC1Q9NQ79 661 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 ASB3Q9Y575 518 aa20.68■□□□□ 0.9
PTCH1-227ENST00000553256 HMGA1P17096 107 aaKnown RBP20.67■□□□□ 0.9
PTCH1-227ENST00000553256 NPR3P17342 541 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 ATICP31939 592 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 TUFMP49411 452 aaKnown RBP20.67■□□□□ 0.9
PTCH1-227ENST00000553256 PLD1Q13393 1074 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 SV2AQ7L0J3 742 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 DCP1BQ8IZD4 617 aaKnown RBP20.67■□□□□ 0.9
PTCH1-227ENST00000553256 LPIN3Q9BQK8 851 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 ABCB6Q9NP58 842 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 SLC2A4RGQ9NR83 387 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 RMND1Q9NWS8 449 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 ARIH1Q9Y4X5 557 aaPredicted RBP20.67■□□□□ 0.9
PTCH1-227ENST00000553256 NCANO14594 1321 aa20.67■□□□□ 0.9
PTCH1-227ENST00000553256 ATP2C2O75185 946 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 SRFP11831 508 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 PPP3CAQ08209 521 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 NFE2Q16621 373 aaPredicted RBP20.66■□□□□ 0.9
PTCH1-227ENST00000553256 CFAP221Q4G0U5 840 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 CLEC17AQ6ZS10 378 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 PDZD4Q76G19 769 aaPredicted RBP20.66■□□□□ 0.9
PTCH1-227ENST00000553256 TMEM150AQ86TG1 271 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 FBXL6Q8N531 539 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 PBXIP1Q96AQ6 731 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 MCRS1Q96EZ8 462 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 CCDC34Q96HJ3 373 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 PLA2G2FQ9BZM2 168 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 TRPV4Q9HBA0 871 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 ASAH2Q9NR71 780 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 MAN1B1Q9UKM7 699 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 GTF3C4Q9UKN8 822 aa20.66■□□□□ 0.9
PTCH1-227ENST00000553256 ZNF197O14709 1029 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 ECI2O75521 394 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 CD44P16070 742 aaKnown RBP20.65■□□□□ 0.9
PTCH1-227ENST00000553256 GJA1P17302 382 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 ALDH1A3P47895 512 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 GPR15P49685 360 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 EPHB3P54753 998 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 MYL7Q01449 175 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 TSPY1Q01534 308 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 ADAM9Q13443 819 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 NCOA4Q13772 614 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 WDR72Q3MJ13 1102 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 FAM78AQ5JUQ0 283 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 IER5LQ5T953 404 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 CEP135Q66GS9 1140 aa20.65■□□□□ 0.9
PTCH1-227ENST00000553256 IQCEQ6IPM2 695 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms