RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SNX9Q9Y5X1 595 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 COL4A3Q01955 1670 aa17.1■□□□□ 0.33
CDK4-215ENST00000553237 A0A1B0GVL5 298 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 KANSL1LA0AUZ9 987 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 FAM170BA6NMN3 283 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 TNNC2P02585 160 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 GLULP15104 373 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 ATF6P18850 670 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 ACAT1P24752 427 aaKnown RBP17.09■□□□□ 0.33
CDK4-215ENST00000553237 GABRR2P28476 465 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 GDI1P31150 447 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 DUOXA2Q1HG44 320 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 VITQ6UXI7 678 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 TPRG1Q6ZUI0 275 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 GAREM2Q75VX8 874 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 ITIH5Q86UX2 942 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 OSTM1Q86WC4 334 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 SPPL2BQ8TCT7 592 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 LEO1Q8WVC0 666 aaPredicted RBP17.09■□□□□ 0.33
CDK4-215ENST00000553237 PAGE5Q96GU1 130 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 KIAA1586Q9HCI6 787 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 HEBP1Q9NRV9 189 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 DDX43Q9NXZ2 648 aaKnown RBP17.09■□□□□ 0.33
CDK4-215ENST00000553237 DLGAP2Q9P1A6 1054 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 TSC2P49815 1807 aa17.09■□□□□ 0.33
CDK4-215ENST00000553237 NCANO14594 1321 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 HEPACAM2A8MVW5 462 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 HCRTO43612 131 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 ACTN4O43707 911 aaKnown RBP17.08■□□□□ 0.32
CDK4-215ENST00000553237 SLFN14P0C7P3 912 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 DLATP10515 647 aaKnown RBP17.08■□□□□ 0.32
CDK4-215ENST00000553237 HAPLN1P10915 354 aaPredicted RBP17.08■□□□□ 0.32
CDK4-215ENST00000553237 PSMC3P17980 439 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 TSPY1Q01534 308 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 SMARCB1Q12824 385 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 VEPH1Q14D04 833 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 SURF1Q15526 300 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 TAF12Q16514 161 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 SNRNP35Q16560 246 aaKnown RBP17.08■□□□□ 0.32
CDK4-215ENST00000553237 FRMD5Q7Z6J6 570 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 C2orf15Q8WU43 125 aaKnown RBP17.08■□□□□ 0.32
CDK4-215ENST00000553237 CCDC127Q96BQ5 260 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 RSPRY1Q96DX4 576 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 SPATA32Q96LK8 384 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 PI4K2AQ9BTU6 479 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.32
CDK4-215ENST00000553237 GPR88Q9GZN0 384 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 GDAP2Q9NXN4 497 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 PCDHB5Q9Y5E4 795 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 ZFHX2Q9C0A1 2572 aaPredicted RBP17.08■□□□□ 0.32
CDK4-215ENST00000553237 TCHHQ07283 1943 aa17.08■□□□□ 0.32
CDK4-215ENST00000553237 UBE4BO95155 1302 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 GFRA3O60609 400 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 PRPF40AO75400 957 aaKnown RBP17.07■□□□□ 0.32
CDK4-215ENST00000553237 PFKFB1P16118 471 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 CMA1P23946 247 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 GPR15P49685 360 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 KRT85P78386 507 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 MYL7Q01449 175 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 MYO1EQ12965 1108 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 CCDC142Q17RM4 750 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 SOWAHAQ2M3V2 549 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 GPR158Q5T848 1215 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 SDHAF4Q5VUM1 108 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 HS2ST1Q7LGA3 356 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 ARID3BQ8IVW6 561 aaPredicted RBP17.07■□□□□ 0.32
CDK4-215ENST00000553237 ADGRF2Q8IZF7 708 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 TMEM86AQ8N2M4 240 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 XXYLT1Q8NBI6 393 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 HPDLQ96IR7 371 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 ACBD6Q9BR61 282 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 MKNK1Q9BUB5 465 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 TRPV4Q9HBA0 871 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 GTF3C4Q9UKN8 822 aa17.07■□□□□ 0.32
CDK4-215ENST00000553237 KLRC4O43908 158 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 FGF19O95750 216 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 TNNI1P19237 187 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 NBL1P41271 181 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 CYP4F8P98187 520 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 CYP24A1Q07973 514 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 NFE2Q16621 373 aaPredicted RBP17.06■□□□□ 0.32
CDK4-215ENST00000553237 KNOP1Q1ED39 458 aaKnown RBP17.06■□□□□ 0.32
CDK4-215ENST00000553237 BMT2Q1RMZ1 405 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 ARHGAP15Q53QZ3 475 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 INTS6LQ5JSJ4 861 aaKnown RBP17.06■□□□□ 0.32
CDK4-215ENST00000553237 ZNF852Q6ZMS4 543 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 TRAPPC11Q7Z392 1133 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 WDR49Q8IV35 697 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 MFSD6LQ8IWD5 586 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 TOP6BLQ8N6T0 577 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 STKLD1Q8NE28 680 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 DEPDC1BQ8WUY9 529 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 DNASE1L2Q92874 299 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 IRF7Q92985 503 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 FNBP1Q96RU3 617 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 IL21Q9HBE4 155 aa17.06■□□□□ 0.32
CDK4-215ENST00000553237 PROB1E7EW31 1015 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 ZNF263O14978 683 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms