RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 CYP2U1Q7Z449 544 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 USP37Q86T82 979 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 ITIH5Q86UX2 942 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 DIS3L2Q8IYB7 885 aaKnown RBP14.05□□□□□ -0.16
VPS29-211ENST00000553128 MAB21L3Q8N8X9 362 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 PIGKQ92643 395 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 TMEM134Q9H6X4 195 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 FSCN3Q9NQT6 498 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 ANKFY1Q9P2R3 1169 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 GPSM3Q9Y4H4 160 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 IGSF10Q6WRI0 2623 aa14.05□□□□□ -0.16
VPS29-211ENST00000553128 CACNA1EQ15878 2313 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 ADAMTS20P59510 1910 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 HIP1RO75146 1068 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 CDC25CP30307 473 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 DHPSP49366 369 aaPredicted RBP14.04□□□□□ -0.16
VPS29-211ENST00000553128 SIM1P81133 766 aaPredicted RBP14.04□□□□□ -0.16
VPS29-211ENST00000553128 PSMD2Q13200 908 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 ZBTB6Q15916 424 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 MGAT5BQ3V5L5 792 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 SLC39A12Q504Y0 691 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 TXNDC8Q6A555 127 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 DSTYKQ6XUX3 929 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 PROSER1Q86XN7 944 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 CHCHD4Q8N4Q1 142 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 FRMD1Q8N878 549 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 TSTD1Q8NFU3 115 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 KIF12Q96FN5 646 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 OXCT2Q9BYC2 517 aaPredicted RBP14.04□□□□□ -0.16
VPS29-211ENST00000553128 BRMS1Q9HCU9 246 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 TMEM74BQ9NUR3 256 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 KIAA1549LQ6ZVL6 1849 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 MYO16Q9Y6X6 1858 aa14.04□□□□□ -0.16
VPS29-211ENST00000553128 SFI1A8K8P3 1242 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 SLC16A4O15374 487 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 HNRNPLP14866 589 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS29-211ENST00000553128 TYMPP19971 482 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 AVPR1AP37288 418 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 TNFSF9P41273 254 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 MAPK7Q13164 816 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 NOLC1Q14978 699 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS29-211ENST00000553128 FBXO43Q4G163 708 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 USP39Q53GS9 565 aaKnown RBP14.03□□□□□ -0.16
VPS29-211ENST00000553128 TRIM61Q5EBN2 209 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 ANO7Q6IWH7 933 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 ARMCX6Q7L4S7 300 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 PIP4P1Q86T03 277 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 MDGA1Q8NFP4 955 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 RLN3Q8WXF3 142 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 BBC3Q96PG8 261 aaPredicted RBP14.03□□□□□ -0.16
VPS29-211ENST00000553128 TM6SF1Q9BZW5 370 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 ECT2Q9H8V3 914 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 KMT5AQ9NQR1 393 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 TDP1Q9NUW8 608 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 DAXXQ9UER7 740 aaPredicted RBP14.03□□□□□ -0.16
VPS29-211ENST00000553128 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 THADAQ6YHU6 1953 aa14.03□□□□□ -0.16
VPS29-211ENST00000553128 ATXN2Q99700 1313 aaKnown RBP14.02□□□□□ -0.17
VPS29-211ENST00000553128 TTC26A0AVF1 554 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 F11P03951 625 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 HMGA1P17096 107 aaKnown RBP14.02□□□□□ -0.17
VPS29-211ENST00000553128 ENGP17813 658 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 CCT6AP40227 531 aaKnown RBP14.02□□□□□ -0.17
VPS29-211ENST00000553128 PTGER3P43115 390 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 GPR15P49685 360 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 SEC13P55735 322 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 NLRP12P59046 1061 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 BFSP1Q12934 665 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 DMP1Q13316 513 aaPredicted RBP14.02□□□□□ -0.17
VPS29-211ENST00000553128 COL28A1Q2UY09 1125 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 ARMCX5Q6P1M9 558 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 PDZD3Q86UT5 571 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 LRRTM3Q86VH5 581 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 RASSF3Q86WH2 238 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 NECAB1Q8N987 351 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 TTC16Q8NEE8 873 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 ERMNQ8TAM6 284 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 CD101Q93033 1021 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 ACDQ96AP0 544 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 SENP8Q96LD8 212 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 GCNAQ96QF7 691 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 RUSC1Q9BVN2 902 aa14.02□□□□□ -0.17
VPS29-211ENST00000553128 DDX19AQ9NUU7 478 aaKnown RBP14.02□□□□□ -0.17
VPS29-211ENST00000553128 EVLQ9UI08 416 aaPredicted RBP14.02□□□□□ -0.17
VPS29-211ENST00000553128 MBD1Q9UIS9 605 aaPredicted RBP14.02□□□□□ -0.17
VPS29-211ENST00000553128 TSC2P49815 1807 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 FAM221BA6H8Z2 402 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 LACTBL1A8MY62 500 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 E9PMD0 336 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 TOM1L1O75674 476 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 OR52Z1P0C646 297 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 LILRA4P59901 499 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 SEMA3BQ13214 749 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 VEPH1Q14D04 833 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 ZNF174Q15697 407 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 C2orf27AQ580R0 203 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 WASF1Q92558 559 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 FNBP1Q96RU3 617 aa14.01□□□□□ -0.17
VPS29-211ENST00000553128 SLC22A12Q96S37 553 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms