RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 GAREM1Q9H706 876 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 C6orf50Q9HD87 102 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 TDP1Q9NUW8 608 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 SLC38A7Q9NVC3 462 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 BARHL2Q9NY43 387 aa9.57□□□□□ -0.88
PRKCH-203ENST00000552875 DOPEY1Q5JWR5 2465 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 A0A1B0GTW7 788 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 TCRBV21S2A2A0A5A6 115 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 N4BP3O15049 544 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 MSH4O15457 936 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 NDUFS2O75306 463 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 DDX6P26196 483 aaKnown RBP eCLIP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 MARCKSP29966 332 aaPredicted RBP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 GRK6P43250 576 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 IFNAR2P48551 515 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 USP11P51784 963 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 NUCB1Q02818 461 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 PTH1RQ03431 593 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 NFATC3Q12968 1075 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 MRPL58Q14197 206 aaKnown RBP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 AMHR2Q16671 573 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 PPP4R3AQ6IN85 833 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 TMEM92Q6UXU6 159 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 RNF19BQ6ZMZ0 732 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 TMTC3Q6ZXV5 915 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 CDR2LQ86X02 465 aaPredicted RBP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 TTC9Q92623 222 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 EZH1Q92800 747 aaPredicted RBP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 SLC5A5Q92911 643 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 MTA3Q9BTC8 594 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 SMG9Q9H0W8 520 aaKnown RBP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 DUS2Q9NX74 493 aaKnown RBP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 SLC12A7Q9Y666 1083 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 ATMQ13315 3056 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 COL5A1P20908 1838 aaPredicted RBP9.56□□□□□ -0.88
PRKCH-203ENST00000552875 ABCA12Q86UK0 2595 aa9.56□□□□□ -0.88
PRKCH-203ENST00000552875 PTPRBP23467 1997 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 MUC22E2RYF6 1773 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 K7EQS6 105 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 B4GALT5O43286 388 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 CILPO75339 1184 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 KLF8O95600 359 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 CR2P20023 1033 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 QARSP47897 775 aaKnown RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 NPEPPSP55786 919 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 PCBP4P57723 403 aaKnown RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 CYP4F8P98187 520 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 DUSP4Q13115 394 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 PTPRNQ16849 979 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 TBC1D25Q3MII6 688 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 NAIF1Q69YI7 327 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 TYW1BQ6NUM6 668 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 SYNE3Q6ZMZ3 975 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 DBX2Q6ZNG2 339 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 APBB1IPQ7Z5R6 666 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 ALLCQ8N6M5 410 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 FANCBQ8NB91 859 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 TXNDC5Q8NBS9 432 aaKnown RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 CCDC12Q8WUD4 166 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 OSCP1Q8WVF1 389 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 LENG9Q96B70 501 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 LIN37Q96GY3 246 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 SLC46A2Q9BY10 475 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 DNAJC25Q9H1X3 360 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 GPRC5CQ9NQ84 441 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 BMP2KQ9NSY1 1161 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 PRMT7Q9NVM4 692 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-203ENST00000552875 PCDHGA1Q9Y5H4 931 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 PCDH15Q96QU1 1955 aa9.55□□□□□ -0.88
PRKCH-203ENST00000552875 UBR5O95071 2799 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-203ENST00000552875 CREBBPQ92793 2442 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 PSMD10O75832 226 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 RXRAP19793 462 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 VAC14Q08AM6 782 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 GLRA4Q5JXX5 417 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 TRMT11Q7Z4G4 463 aaKnown RBP9.54□□□□□ -0.88
PRKCH-203ENST00000552875 CHD1LQ86WJ1 897 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 C3orf58Q8NDZ4 430 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 BEST2Q8NFU1 509 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 USP13Q92995 863 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-203ENST00000552875 ZNF419Q96HQ0 510 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-203ENST00000552875 PGLYRP2Q96PD5 576 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 PPP1R10Q96QC0 940 aaKnown RBP9.54□□□□□ -0.88
PRKCH-203ENST00000552875 CPNE5Q9HCH3 593 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 RBM28Q9NW13 759 aaKnown RBP9.54□□□□□ -0.88
PRKCH-203ENST00000552875 FTSJ1Q9UET6 329 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.54□□□□□ -0.88
PRKCH-203ENST00000552875 NFE2L3Q9Y4A8 694 aa9.54□□□□□ -0.88
PRKCH-203ENST00000552875 MYMKA6NI61 221 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 MEI4A8MW99 385 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 E7EWF7 191 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 SGK1O00141 431 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 PODXLO00592 558 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 BRINP1O60477 761 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 NFATC1O95644 943 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 C1SP09871 688 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 MYF5P13349 255 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 GNA11P29992 359 aa9.53□□□□□ -0.88
PRKCH-203ENST00000552875 YWHABP31946 246 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms