RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 TMEM209Q96SK2 561 aa13.47□□□□□ -0.25
CDK4-214ENST00000552862 PLIN2Q99541 437 aa13.47□□□□□ -0.25
CDK4-214ENST00000552862 KIF2CQ99661 725 aa13.47□□□□□ -0.25
CDK4-214ENST00000552862 SEPT5Q99719 369 aaPredicted RBP13.47□□□□□ -0.25
CDK4-214ENST00000552862 PYM1Q9BRP8 204 aaKnown RBP13.47□□□□□ -0.25
CDK4-214ENST00000552862 CUEDC2Q9H467 287 aa13.47□□□□□ -0.25
CDK4-214ENST00000552862 TDP1Q9NUW8 608 aa13.47□□□□□ -0.25
CDK4-214ENST00000552862 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
CDK4-214ENST00000552862 PCDHGA5Q9Y5G8 931 aa13.47□□□□□ -0.25
CDK4-214ENST00000552862 TIMM13Q9Y5L4 95 aaPredicted RBP13.47□□□□□ -0.25
CDK4-214ENST00000552862 LRRN2O75325 713 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 HAPLN1P10915 354 aaPredicted RBP13.46□□□□□ -0.25
CDK4-214ENST00000552862 PLCG1P19174 1290 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 CTHP32929 405 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 CCR2P41597 374 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 SF3A1Q15459 793 aaKnown RBP13.46□□□□□ -0.25
CDK4-214ENST00000552862 SEZ6Q53EL9 994 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 PRR23BQ6ZRT6 265 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 CACNA2D4Q7Z3S7 1137 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 CCDC65Q8IXS2 484 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 CPA6Q8N4T0 437 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 ATAD1Q8NBU5 361 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 ANKRD36BP1Q96IX9 119 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 ZSWIM3Q96MP5 696 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 LRRC3Q9BY71 257 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 SRPRBQ9Y5M8 271 aaKnown RBP13.46□□□□□ -0.25
CDK4-214ENST00000552862 MYH15Q9Y2K3 1946 aa13.46□□□□□ -0.25
CDK4-214ENST00000552862 CACNA1IQ9P0X4 2223 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 VPS13AQ96RL7 3174 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 ARNTLO00327 626 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 SLC9A3R1O14745 358 aaPredicted RBP13.45□□□□□ -0.26
CDK4-214ENST00000552862 MOSPD3O75425 235 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 USP17L7P0C7H9 530 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 TNFSF9P41273 254 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 DPP6P42658 865 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 ACOT2P49753 483 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 RUNX3Q13761 415 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 IL31Q6EBC2 164 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 VSTM1Q6UX27 236 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 MON1AQ86VX9 555 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 WDR5BQ86VZ2 330 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 TMC8Q8IU68 726 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 ZNF687Q8N1G0 1237 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 TOP6BLQ8N6T0 577 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 C12orf50Q8NA57 414 aaPredicted RBP13.45□□□□□ -0.26
CDK4-214ENST00000552862 ACDQ96AP0 544 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 TRMT2BQ96GJ1 504 aaKnown RBP13.45□□□□□ -0.26
CDK4-214ENST00000552862 GDAP2Q9NXN4 497 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 CGNQ9P2M7 1197 aaKnown RBP13.45□□□□□ -0.26
CDK4-214ENST00000552862 VWA8A3KMH1 1905 aa13.45□□□□□ -0.26
CDK4-214ENST00000552862 ZNF292O60281 2723 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 MYO15AQ9UKN7 3530 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 TRDMT1O14717 391 aaKnown RBP13.44□□□□□ -0.26
CDK4-214ENST00000552862 EXTL3O43909 919 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 FAM189A1O60320 539 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 RHOBTB1O94844 696 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 TNNC2P02585 160 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 TMEM191BP0C7N4 346 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 LIMK1P53667 647 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 ATXN1P54253 815 aaKnown RBP13.44□□□□□ -0.26
CDK4-214ENST00000552862 TFAMQ00059 246 aaKnown RBP13.44□□□□□ -0.26
CDK4-214ENST00000552862 SPAG1Q07617 926 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 BYSLQ13895 437 aaKnown RBP13.44□□□□□ -0.26
CDK4-214ENST00000552862 MCM6Q14566 821 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 DUOXA2Q1HG44 320 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 L1TD1Q5T7N2 865 aaKnown RBP13.44□□□□□ -0.26
CDK4-214ENST00000552862 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 SPATA2LQ8IUW3 424 aaPredicted RBP13.44□□□□□ -0.26
CDK4-214ENST00000552862 DCLK2Q8N568 766 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 ATP2A3Q93084 1043 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 INTS4Q96HW7 963 aaKnown RBP13.44□□□□□ -0.26
CDK4-214ENST00000552862 MYRFLQ96LU7 910 aa13.44□□□□□ -0.26
CDK4-214ENST00000552862 TRAV19A0A0A6YYK7 116 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 ZNF233A6NK53 670 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 CHURC1-FNTBB4DL54 471 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 SLC30A4O14863 429 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 ZBTB24O43167 697 aaPredicted RBP13.43□□□□□ -0.26
CDK4-214ENST00000552862 GCNT3O95395 438 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 ANXA13P27216 316 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 MAGEA11P43364 429 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 NLRP12P59046 1061 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 CCINQ13939 588 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 E2F5Q15329 346 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 ELF2Q15723 593 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 HSF5Q4G112 596 aaPredicted RBP13.43□□□□□ -0.26
CDK4-214ENST00000552862 DDX42Q86XP3 938 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDK4-214ENST00000552862 FANCMQ8IYD8 2048 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 CSGALNACT2Q8N6G5 542 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 ST13P5Q8NFI4 369 aaPredicted RBP13.43□□□□□ -0.26
CDK4-214ENST00000552862 DNAJC25Q9H1X3 360 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 GKN1Q9NS71 199 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 SEMA4GQ9NTN9 838 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 BLOC1S4Q9NUP1 217 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 ABI2Q9NYB9 513 aaPredicted RBP13.43□□□□□ -0.26
CDK4-214ENST00000552862 RBAKQ9NYW8 714 aaPredicted RBP13.43□□□□□ -0.26
CDK4-214ENST00000552862 TBC1D7Q9P0N9 293 aa13.43□□□□□ -0.26
CDK4-214ENST00000552862 F5P12259 2224 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms