RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CPLX1O14810 134 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 MED24O75448 989 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 TRIM16O95361 564 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 ZIC2O95409 532 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 MARCKSP29966 332 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 CYP4F8P98187 520 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 YWHAHQ04917 246 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 CALCRLQ16602 461 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 TAS1R3Q7RTX0 852 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 CYP2U1Q7Z449 544 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 RAB44Q7Z6P3 723 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 RASSF3Q86WH2 238 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 ATAD1Q8NBU5 361 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 RPLP0P6Q8NHW5 317 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 RIN3Q8TB24 985 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 ACAP3Q96P50 834 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 IPO9Q96P70 1041 aaKnown RBP12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 NACC1Q96RE7 527 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 SMG9Q9H0W8 520 aaKnown RBP12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 SLC32A1Q9H598 525 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 INVSQ9Y283 1065 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 KALRNO60229 2985 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 K7ERI5 159 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 SOAT2O75908 522 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 ARSAP15289 507 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 GBP1P32455 592 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 GJA4P35212 333 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 TXKP42681 527 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 DGKEP52429 567 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 OSTNP61366 133 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 SIM1P81133 766 aaPredicted RBP12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 AMPD2Q01433 879 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 LMAN2Q12907 356 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 MYBPC2Q14324 1141 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 COL28A1Q2UY09 1125 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 SLC10A6Q3KNW5 377 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 USP39Q53GS9 565 aaKnown RBP12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 TRIM68Q6AZZ1 485 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 TMEM150AQ86TG1 271 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 TMEM130Q8N3G9 435 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 CHCHD4Q8N4Q1 142 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 OLIG1Q8TAK6 271 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 USP13Q92995 863 aaPredicted RBP12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 ACDQ96AP0 544 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 P2RY13Q9BPV8 354 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 POLD4Q9HCU8 107 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 CACNA2D2Q9NY47 1150 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 CCL26Q9Y258 94 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 TIMM13Q9Y5L4 95 aaPredicted RBP12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 PTPRBP23467 1997 aa12.38□□□□□ -0.43
SUPT16H-202ENST00000552829 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 CELSR3Q9NYQ7 3312 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 LARGE1O95461 756 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 MCF2P10911 925 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 PSMA5P28066 241 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 CDC25CP30307 473 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 LRPAP1P30533 357 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 FAM193AP78312 1265 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 SCAPQ12770 1279 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 NR5A1Q13285 461 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 ZNF568Q3ZCX4 644 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 ITIH5Q86UX2 942 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 HOMEZQ8IX15 550 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 PIGKQ92643 395 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 IFT74Q96LB3 600 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 CNOT6LQ96LI5 555 aaKnown RBP12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 KIF2CQ99661 725 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 TMEM134Q9H6X4 195 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 ZSWIM6Q9HCJ5 1215 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 ANKFY1Q9P2R3 1169 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 TUBGCP4Q9UGJ1 667 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 SHROOM3Q8TF72 1996 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 PCDH15Q96QU1 1955 aa12.37□□□□□ -0.43
SUPT16H-202ENST00000552829 GOLGA4Q13439 2230 aaKnown RBP12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 TNFRSF10BO14763 440 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 NEMFO60524 1076 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 ATF6P18850 670 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 TYMPP19971 482 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 RPA1P27694 616 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 ZBTB6Q15916 424 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 PEAR1Q5VY43 1037 aaPredicted RBP12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 SLC23A3Q6PIS1 610 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 CPLX2Q6PUV4 134 aaKnown RBP12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 RUFY3Q7L099 469 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 TSTD1Q8NFU3 115 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 USP33Q8TEY7 942 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 KIFAP3Q92845 792 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 LPIN3Q9BQK8 851 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 TARS2Q9BW92 718 aaKnown RBP12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 MRPL4Q9BYD3 311 aaKnown RBP12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 TPSD1Q9BZJ3 242 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 TMEM74BQ9NUR3 256 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 TDP1Q9NUW8 608 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 ARHGAP28Q9P2N2 729 aa12.36□□□□□ -0.43
SUPT16H-202ENST00000552829 SCN1AP35498 2009 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms