RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.61□□□□□ -1.99
TGFBR1-210ENST00000552573 NR2E3Q9Y5X4 410 aa2.61□□□□□ -1.99
TGFBR1-210ENST00000552573 CGB1A6NKQ9 187 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 F5H697 171 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 M0QYG6 137 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 AKAP10O43572 662 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 C1RP00736 705 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 PIM1P11309 404 aaPredicted RBP2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 JUPP14923 745 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 GCLCP48506 637 aaPredicted RBP2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 ITIH3Q06033 890 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 EXOSC9Q06265 439 aaKnown RBP2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 FOXF2Q12947 444 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 TTF1Q15361 905 aaPredicted RBP2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 RBM20Q5T481 1227 aaKnown RBP2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 FAM160B1Q5W0V3 765 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 B3GALNT2Q8NCR0 500 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 DIS3LQ8TF46 1054 aaKnown RBP2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 ZNF384Q8TF68 577 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 SARAFQ96BY9 339 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 SLC35A4Q96G79 324 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 PBKQ96KB5 322 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 MRGPRX1Q96LB2 322 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 CGRRF1Q99675 332 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 HEPHQ9BQS7 1158 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 AASDHPPTQ9NRN7 309 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 DKK3Q9UBP4 350 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 GABBR1Q9UBS5 961 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 HESX1Q9UBX0 185 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 AOX1Q06278 1338 aa2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 POLR2AP24928 1970 aaKnown RBP2.6□□□□□ -1.99
TGFBR1-210ENST00000552573 COL3A1P02461 1466 aaPredicted RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 H3BUI4 141 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 TRIAP1O43715 76 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 SOAT2O75908 522 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 PDHA1P08559 390 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 VCAM1P19320 739 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 IBSPP21815 317 aaPredicted RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 RAB27AP51159 221 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 SOX8P57073 446 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 SP2Q02086 613 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 KRTAP1-1Q07627 177 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 HNRNPA0Q13151 305 aaKnown RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 PIN1Q13526 163 aaPredicted RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 ZNF788Q6ZQV5 615 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 GRASPQ7Z6J2 395 aaPredicted RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 TPH2Q8IWU9 490 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 RAVER1Q8IY67 606 aaKnown RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 GRAMD1CQ8IYS0 662 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 FAM46DQ8NEK8 389 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 KLHDC4Q8TBB5 520 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 ANKS1AQ92625 1134 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 DPF1Q92782 380 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 NELL1Q92832 810 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 DDX17Q92841 729 aaKnown RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 FKBP10Q96AY3 582 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 FAM136AQ96C01 138 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 C1GALT1C1Q96EU7 318 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 CDK5RAP3Q96JB5 506 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 SLC46A1Q96NT5 459 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 MAP3K14Q99558 947 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 SPATA5L1Q9BVQ7 753 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 ACTRT3Q9BYD9 372 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 TPSD1Q9BZJ3 242 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 SIK2Q9H0K1 926 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 CPNE5Q9HCH3 593 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 KMT5AQ9NQR1 393 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 ADARB2Q9NS39 739 aaKnown RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 PNMA8BQ9ULN7 279 aaPredicted RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 PCDHA6Q9UN73 950 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 ST3GAL5Q9UNP4 418 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 STXBP5LQ9Y2K9 1186 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 THRAP3Q9Y2W1 955 aaKnown RBP2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 RAD54BQ9Y620 910 aa2.59□□□□□ -1.99
TGFBR1-210ENST00000552573 hCG_2014768A0A024R1R8 64 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 A0A088AWK7 358 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 H3BML4 177 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 INO80B-WBP1J3KQ70 363 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 PPM1DO15297 605 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 AP1G1O43747 822 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 OFD1O75665 1012 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 URI1O94763 535 aaPredicted RBP2.58□□□□□ -2
TGFBR1-210ENST00000552573 UNC5CO95185 931 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 ERBB2P04626 1255 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 GNAI2P04899 355 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 NR2F6P10588 404 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 ITGALP20701 1170 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 DRD4P21917 467 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 CD6P30203 668 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 ARFIP2P53365 341 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 SOX10P56693 466 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 RAB1AP62820 205 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 TFF2Q03403 129 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 TBCCQ15814 346 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 AKNAD1Q5T1N1 836 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 IFIT1BQ5T764 474 aaKnown RBP2.58□□□□□ -2
TGFBR1-210ENST00000552573 TSTD2Q5T7W7 516 aa2.58□□□□□ -2
TGFBR1-210ENST00000552573 TMEM108Q6UXF1 575 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms