RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 RIN3Q8TB24 985 aa19.34■□□□□ 0.69
PRPF40B-215ENST00000551418 IER2Q9BTL4 223 aa19.34■□□□□ 0.69
PRPF40B-215ENST00000551418 ASB7Q9H672 318 aa19.34■□□□□ 0.69
PRPF40B-215ENST00000551418 TBC1D7Q9P0N9 293 aa19.34■□□□□ 0.69
PRPF40B-215ENST00000551418 CCL26Q9Y258 94 aa19.34■□□□□ 0.69
PRPF40B-215ENST00000551418 CLIC4Q9Y696 253 aa19.34■□□□□ 0.69
PRPF40B-215ENST00000551418 OTOL1A6NHN0 477 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 TULP1O00294 542 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 TUFMP49411 452 aaKnown RBP19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 TAF6P49848 677 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 LMNB2Q03252 620 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 SIM2Q14190 667 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 ARHGAP15Q53QZ3 475 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 SDHAF4Q5VUM1 108 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 ITIH5Q86UX2 942 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 RALGPS2Q86X27 583 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 BPIFB1Q8TDL5 484 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 CHFRQ96EP1 664 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 CCSER1Q9C0I3 900 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 ST6GALNAC4Q9H4F1 302 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 GKN1Q9NS71 199 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 POLR3BQ9NW08 1133 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 ABI2Q9NYB9 513 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 HSFX1Q9UBD0 423 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 C2CD2Q9Y426 696 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 OBSL1O75147 1896 aa19.33■□□□□ 0.68
PRPF40B-215ENST00000551418 PPP1R37O75864 691 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 F11P03951 625 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 HMGA1P17096 107 aaKnown RBP19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 CCINQ13939 588 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 LRRC32Q14392 662 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 PPP2R5DQ14738 602 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 PTPAQ15257 358 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 CCDC142Q17RM4 750 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 TRIM68Q6AZZ1 485 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 LAIR1Q6GTX8 287 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 FAM173BQ6P4H8 233 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 STRA6Q9BX79 667 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 FGFBP2Q9BYJ0 223 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 OBP2AQ9NY56 170 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 CDV3Q9UKY7 258 aaKnown RBP19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 RAB23Q9ULC3 237 aa19.32■□□□□ 0.68
PRPF40B-215ENST00000551418 TPRP12270 2363 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 MYMKA6NI61 221 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 KPNA7A9QM74 516 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 PRR5-ARHGAP8B1AHC4 643 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 EXTL3O43909 919 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 FGF19O95750 216 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 RETP07949 1114 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 SCP2P22307 547 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 PXNP49023 591 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 ARHGAP8P85298 464 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 SLFN12LQ6IEE8 588 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 METTL23Q86XA0 190 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 THEM5Q8N1Q8 247 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 MAB21L3Q8N8X9 362 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 KRI1Q8N9T8 703 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 POMGNT1Q8WZA1 660 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 DNAJC19Q96DA6 116 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 SAAL1Q96ER3 474 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 CNTNAP3BQ96NU0 1288 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 CLIC6Q96NY7 704 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 PI4K2AQ9BTU6 479 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 CNTNAP3Q9BZ76 1288 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 FBRSL1Q9HCM7 1045 aaKnown RBP19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 HPS4Q9NQG7 708 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 DSEQ9UL01 958 aa19.31■□□□□ 0.68
PRPF40B-215ENST00000551418 HCRTO43612 131 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 GDF9O60383 454 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 PAPSS2O95340 614 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 PAX3P23760 479 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 WEE1P30291 646 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 CDC25CP30307 473 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 CASP5P51878 434 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 NLRP12P59046 1061 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 VEPH1Q14D04 833 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 DGKKQ5KSL6 1271 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 NAIF1Q69YI7 327 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 TXNDC8Q6A555 127 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 LONP2Q86WA8 852 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 CMTM8Q8IZV2 173 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 USP13Q92995 863 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 MSANTD3Q96H12 275 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 FAM83CQ9BQN1 747 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 FAM213AQ9BRX8 229 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 SEMA4GQ9NTN9 838 aa19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 FBXO2Q9UK22 296 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-215ENST00000551418 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 GOLGA8IPA6NC78 632 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 GOLGA8JA6NMD2 632 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 BMP15O95972 392 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 ARSAP15289 507 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 ACAT1P24752 427 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 POLR2BP30876 1174 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 MCM2P49736 904 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 TFAMQ00059 246 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 TAF12Q16514 161 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 DDR2Q16832 855 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 ITPRIPL2Q3MIP1 535 aa19.29■□□□□ 0.68
PRPF40B-215ENST00000551418 FSTL4Q6MZW2 842 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms