RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TUBGCP4Q9UGJ1 667 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 IP6K2Q9UHH9 426 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 RASAL2Q9UJF2 1139 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 MTUS1Q9ULD2 1270 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAB5C-208ENST00000551338 USTQ9Y2C2 406 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 UTP11Q9Y3A2 253 aaKnown RBP12.2□□□□□ -0.46
RAB5C-208ENST00000551338 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
RAB5C-208ENST00000551338 RECQL4O94761 1208 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 VDRP11473 427 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 P4HA1P13674 534 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 TCF4P15884 667 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 CYP3A5P20815 502 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 GJC1P36383 396 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 FLT3P36888 993 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 FNTAP49354 379 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 NDST1P52848 882 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 GYS2P54840 703 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 TAP1Q03518 808 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 UAP1Q16222 522 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-208ENST00000551338 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
RAB5C-208ENST00000551338 ZDHHC24Q6UX98 284 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 ANKS1BQ7Z6G8 1248 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 IQCKQ8N0W5 287 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 NIPA2Q8N8Q9 360 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 RUNDC3BQ96NL0 473 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 TRIM31Q9BZY9 425 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-208ENST00000551338 LRRC19Q9H756 370 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 ZDHHC18Q9NUE0 388 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 GRHL1Q9NZI5 618 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 CNTN3Q9P232 1028 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 STRIP2Q9ULQ0 834 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 BARX2Q9UMQ3 279 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-208ENST00000551338 HES2Q9Y543 173 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 NME7Q9Y5B8 376 aa12.19□□□□□ -0.46
RAB5C-208ENST00000551338 GOLGA8SH3BPF8 625 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 DUSP11O75319 330 aaKnown RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 ERBB2P04626 1255 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 KCNJ1P48048 391 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 TM4SF4P48230 202 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 YARSP54577 528 aaKnown RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 DRG2P55039 364 aaKnown RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 DMTNQ08495 405 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 KLF1Q13351 362 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 LLGL1Q15334 1064 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 GLRA4Q5JXX5 417 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 CFAP58Q5T655 872 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 ALKAL1Q6UXT8 129 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 BEST2Q8NFU1 509 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 EXD1Q8NHP7 514 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 JOSD2Q8TAC2 188 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 MAIP1Q8WWC4 291 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 C1orf54Q8WWF1 131 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 TRIB2Q92519 343 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 SLCO2A1Q92959 643 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 CPXM1Q96SM3 734 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 DCLK3Q9C098 648 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 ARHGAP39Q9C0H5 1083 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 UPF3AQ9H1J1 476 aaKnown RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 CHST7Q9NS84 486 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 LCMT1Q9UIC8 334 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 GABRQQ9UN88 632 aa12.18□□□□□ -0.46
RAB5C-208ENST00000551338 PIN4Q9Y237 131 aaKnown RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 ZNF638Q14966 1978 aaKnown RBP12.18□□□□□ -0.46
RAB5C-208ENST00000551338 SIGLEC16A6NMB1 481 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 M0QYV0 167 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 PODXLO00592 558 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 CA12O43570 354 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 KRT1P04264 644 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 RALAP11233 206 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 HSD17B3P37058 310 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 RPL21P46778 160 aaKnown RBP12.17□□□□□ -0.46
RAB5C-208ENST00000551338 CRYBB1P53674 252 aaPredicted RBP12.17□□□□□ -0.46
RAB5C-208ENST00000551338 GJA9P57773 515 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 PIGHQ14442 188 aaPredicted RBP12.17□□□□□ -0.46
RAB5C-208ENST00000551338 CNGA2Q16280 664 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 GLIPR1L2Q4G1C9 344 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 ATP13A4Q4VNC1 1196 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 SGO2Q562F6 1265 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 TTMPQ5BVD1 217 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 XKR4Q5GH76 650 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 LRRC38Q5VT99 294 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 DCUN1D2Q6PH85 259 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 TMC3Q7Z5M5 1100 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 FAM228AQ86W67 206 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 XYLT1Q86Y38 959 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 LRRC52Q8N7C0 313 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 EXOC4Q96A65 974 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 LRRC45Q96CN5 670 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 SLITRK1Q96PX8 696 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 MRPL45Q9BRJ2 306 aaKnown RBP12.17□□□□□ -0.46
RAB5C-208ENST00000551338 MTG1Q9BT17 334 aaPredicted RBP12.17□□□□□ -0.46
RAB5C-208ENST00000551338 APOL6Q9BWW8 343 aa12.17□□□□□ -0.46
RAB5C-208ENST00000551338 TXLNGYQ9BZA5 131 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms