RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 F5H423 210 aaPredicted RBP5.91□□□□□ -1.46
LIMA1-205ENST00000550592 POLRMTO00411 1230 aaKnown RBP5.91□□□□□ -1.46
LIMA1-205ENST00000550592 AREL1O15033 823 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 CYP2C9P11712 490 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 XRCC6P12956 609 aaKnown RBP eCLIP5.91□□□□□ -1.46
LIMA1-205ENST00000550592 IL6STP40189 918 aaPredicted RBP5.91□□□□□ -1.46
LIMA1-205ENST00000550592 VIPR2P41587 438 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 TOB1P50616 345 aaPredicted RBP5.91□□□□□ -1.46
LIMA1-205ENST00000550592 ZNF844Q08AG5 666 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 PMS2P11Q13670 270 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 DHX8Q14562 1220 aaKnown RBP5.91□□□□□ -1.46
LIMA1-205ENST00000550592 GRAMD1BQ3KR37 738 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 DCAF12L1Q5VU92 463 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 BEND5Q7L4P6 421 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 MPP5Q8N3R9 675 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 OR56A1Q8NGH5 318 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 POC1BQ8TC44 478 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 IQCDQ96DY2 449 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 LRIG1Q96JA1 1093 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 MOGAT1Q96PD6 335 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 MED15Q96RN5 788 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 SMOQ99835 787 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 RNPEPQ9H4A4 650 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 HSFX1Q9UBD0 423 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 ATP11BQ9Y2G3 1177 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 LRCH1Q9Y2L9 728 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 CHST2Q9Y4C5 530 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 USP15Q9Y4E8 981 aaPredicted RBP5.91□□□□□ -1.46
LIMA1-205ENST00000550592 DNMBPQ6XZF7 1577 aa5.91□□□□□ -1.46
LIMA1-205ENST00000550592 A0A0G2JLL6 359 aaPredicted RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 CLCA1A8K7I4 914 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 TRIM24O15164 1050 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 ZNF185O15231 689 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 THAP12O43422 761 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 TCEA3O75764 348 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 TXNP10599 105 aaKnown RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 HARSP12081 509 aaKnown RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 HOXA5P20719 270 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 RNASE9P60153 205 aaKnown RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 CNGB1Q14028 1251 aaPredicted RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 BOP1Q14137 746 aaKnown RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 RRP1BQ14684 758 aaKnown RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 CATSPERGQ6ZRH7 1159 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 RNF44Q7L0R7 432 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 GAS2L3Q86XJ1 694 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 MYLK4Q86YV6 388 aaPredicted RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 ZNF483Q8TF39 744 aaPredicted RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 POF1BQ8WVV4 589 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 SPSB4Q96A44 273 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 TRIB1Q96RU8 372 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 MESP1Q9BRJ9 268 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 MS4A7Q9GZW8 240 aaPredicted RBP5.9□□□□□ -1.46
LIMA1-205ENST00000550592 XPNPEP3Q9NQH7 507 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 CTTNBP2NLQ9P2B4 639 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 CDYLQ9Y232 598 aa5.9□□□□□ -1.46
LIMA1-205ENST00000550592 RAD54L2Q9Y4B4 1467 aa5.9□□□□□ -1.47
LIMA1-205ENST00000550592 CCDC195A0A1B0GUA6 201 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 CCDC78A2IDD5 438 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 E7ENX8 843 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 ADAMTS3O15072 1205 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 FGFR4P22455 802 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 TRAPPC10P48553 1259 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 HSPA7P48741 367 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 CARSP49589 748 aaKnown RBP5.89□□□□□ -1.47
LIMA1-205ENST00000550592 TAP2Q03519 686 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 IQCB1Q15051 598 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 MPEG1Q2M385 716 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 SLC35G1Q2M3R5 365 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 PDCD4Q53EL6 469 aaKnown RBP5.89□□□□□ -1.47
LIMA1-205ENST00000550592 TAPT1Q6NXT6 567 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 TMPRSS9Q7Z410 1059 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 VGLL2Q8N8G2 317 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 Q8NA96 180 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 NSUN7Q8NE18 718 aaKnown RBP5.89□□□□□ -1.47
LIMA1-205ENST00000550592 IPCEF1Q8WWN9 437 aaPredicted RBP5.89□□□□□ -1.47
LIMA1-205ENST00000550592 TMEM41AQ96HV5 264 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 GDF15Q99988 308 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 HEPHQ9BQS7 1158 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 CRB3Q9BUF7 120 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 STK31Q9BXU1 1019 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 EIF2AQ9BY44 585 aaKnown RBP5.89□□□□□ -1.47
LIMA1-205ENST00000550592 GJB4Q9NTQ9 266 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 EIF2B4Q9UI10 523 aaKnown RBP5.89□□□□□ -1.47
LIMA1-205ENST00000550592 CDC23Q9UJX2 597 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 ITGB1BP2Q9UKP3 347 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 CNOT11Q9UKZ1 510 aaKnown RBP5.89□□□□□ -1.47
LIMA1-205ENST00000550592 NEU2Q9Y3R4 380 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 PCDHGB2Q9Y5G2 931 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 POLA1P09884 1462 aaPredicted RBP5.89□□□□□ -1.47
LIMA1-205ENST00000550592 CEP170Q5SW79 1584 aa5.89□□□□□ -1.47
LIMA1-205ENST00000550592 WDR97A6NE52 1622 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 AHRRA9YTQ3 701 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 DCLK1O15075 740 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 PLA2G6O60733 806 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 VPS4BO75351 444 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 RECQL4O94761 1208 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 ELANEP08246 267 aa5.88□□□□□ -1.47
LIMA1-205ENST00000550592 BTF3P20290 206 aaKnown RBP5.88□□□□□ -1.47
LIMA1-205ENST00000550592 EEF1GP26641 437 aaKnown RBP5.88□□□□□ -1.47
LIMA1-205ENST00000550592 TECP42680 631 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms