RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 LPIN3Q9BQK8 851 aa24.9■■□□□ 1.58
SMARCD1-209ENST00000550477 MRPL44Q9H9J2 332 aaKnown RBP24.9■■□□□ 1.58
SMARCD1-209ENST00000550477 GTSE1Q9NYZ3 720 aa24.9■■□□□ 1.58
SMARCD1-209ENST00000550477 PCDHB5Q9Y5E4 795 aa24.9■■□□□ 1.58
SMARCD1-209ENST00000550477 TCHHQ07283 1943 aa24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 FOXD2O60548 495 aaPredicted RBP24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 HAPLN1P10915 354 aaPredicted RBP24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 DDX6P26196 483 aaKnown RBP eCLIP24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 SOX9P48436 509 aa24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 ATXN1P54253 815 aaKnown RBP24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 LPAL2Q16609 132 aa24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 ITPRIPL2Q3MIP1 535 aa24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 TTC8Q8TAM2 541 aa24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 MKNK1Q9BUB5 465 aa24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 ABI2Q9NYB9 513 aaPredicted RBP24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 R3HCC1Q9Y3T6 440 aaKnown RBP24.89■■□□□ 1.58
SMARCD1-209ENST00000550477 SCN1AP35498 2009 aa24.89■■□□□ 1.57
SMARCD1-209ENST00000550477 COL4A2P08572 1712 aa24.89■■□□□ 1.57
SMARCD1-209ENST00000550477 NCANO14594 1321 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 NUP210Q8TEM1 1887 aaPredicted RBP24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 SOBPA7XYQ1 873 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 CENPBP07199 599 aaPredicted RBP24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 GAP43P17677 238 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 CYP4F8P98187 520 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 SPEM2Q0P670 501 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 BFSP1Q12934 665 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 PON2Q15165 354 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 NFE2Q16621 373 aaPredicted RBP24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 RRAGBQ5VZM2 374 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 WSCD1Q658N2 575 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 SV2BQ7L1I2 683 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 GIPC2Q8TF65 315 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 ZFYVE19Q96K21 471 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 ACCSQ96QU6 501 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 RBM12Q9NTZ6 932 aaKnown RBP24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 PCDHB13Q9Y5F0 798 aa24.88■■□□□ 1.57
SMARCD1-209ENST00000550477 ANK1P16157 1881 aa24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 CHURC1-FNTBB4DL54 471 aa24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 FNTBP49356 437 aa24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 GRIN1Q05586 938 aa24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 CC2D1AQ6P1N0 951 aaPredicted RBP24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 CEP68Q76N32 757 aa24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 SFR1Q86XK3 245 aa24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 CMTM8Q8IZV2 173 aa24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 LRRC15Q8TF66 581 aa24.87■■□□□ 1.57
SMARCD1-209ENST00000550477 WDR87Q6ZQQ6 2873 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 VPS37CA5D8V6 355 aaPredicted RBP24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 HUS1O60921 280 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 ATG13O75143 517 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 CSH1P0DML2 217 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 CSH2P0DML3 217 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 ATF6P18850 670 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 TFAMQ00059 246 aaKnown RBP24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 GRSF1Q12849 480 aaKnown RBP eCLIP24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 GAS6Q14393 721 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 SYCP3Q8IZU3 236 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 MRPS31Q92665 395 aaKnown RBP24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 SLC46A2Q9BY10 475 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 KIF9Q9HAQ2 790 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 GKN1Q9NS71 199 aa24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 UXTQ9UBK9 157 aaPredicted RBP24.86■■□□□ 1.57
SMARCD1-209ENST00000550477 PRPF40AO75400 957 aaKnown RBP24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 CD2BP2O95400 341 aaKnown RBP24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 HOXA6P31267 233 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 RPL10AP62906 217 aaKnown RBP24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 MYL7Q01449 175 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 TXNDC11Q6PKC3 985 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 TMEM86AQ8N2M4 240 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 NETO1Q8TDF5 533 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 EPSTI1Q96J88 318 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 LRRC3BQ96PB8 259 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 FAM213AQ9BRX8 229 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 IL21Q9HBE4 155 aa24.85■■□□□ 1.57
SMARCD1-209ENST00000550477 TISP43B9A030 160 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 GCNT3O95395 438 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 PRAMEF12O95522 483 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 TGM1P22735 817 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 ALCAMQ13740 583 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 CCINQ13939 588 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 L1TD1Q5T7N2 865 aaKnown RBP24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 HEATR6Q6AI08 1181 aaKnown RBP24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 CRELD2Q6UXH1 353 aaPredicted RBP24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 CCDC73Q6ZRK6 1079 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 Q6ZS52 159 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 LRRTM3Q86VH5 581 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 MAB21L3Q8N8X9 362 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 ACBD6Q9BR61 282 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 TDP1Q9NUW8 608 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 MAGED2Q9UNF1 606 aaPredicted RBP24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 AGAP1Q9UPQ3 857 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 SRPRBQ9Y5M8 271 aaKnown RBP24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 RALGAPA1Q6GYQ0 2036 aa24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 ZNF638Q14966 1978 aaKnown RBP24.84■■□□□ 1.57
SMARCD1-209ENST00000550477 K7ESF4 209 aa24.83■■□□□ 1.57
SMARCD1-209ENST00000550477 HRO43593 1189 aa24.83■■□□□ 1.57
SMARCD1-209ENST00000550477 IDEP14735 1019 aa24.83■■□□□ 1.57
SMARCD1-209ENST00000550477 GARTP22102 1010 aa24.83■■□□□ 1.57
SMARCD1-209ENST00000550477 TNK2Q07912 1038 aa24.83■■□□□ 1.57
SMARCD1-209ENST00000550477 RUNX3Q13761 415 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms