RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 TFAP2BQ92481 460 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 TMEM176AQ96HP8 235 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 CCDC42Q96M95 316 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 AGPAT1Q99943 283 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 SYT15Q9BQS2 421 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 VN1R3Q9BXE9 311 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 NHEJ1Q9H9Q4 299 aaPredicted RBP8.67□□□□□ -1.02
GPN3-207ENST00000550228 PLXNA4Q9HCM2 1894 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 FAM49BQ9NUQ9 324 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 SPTLC3Q9NUV7 552 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 NOCTQ9UK39 431 aaKnown RBP8.67□□□□□ -1.02
GPN3-207ENST00000550228 DSEQ9UL01 958 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 MTUS1Q9ULD2 1270 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 CNTN6Q9UQ52 1028 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 STXBP5LQ9Y2K9 1186 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 PCDHB12Q9Y5F1 795 aa8.67□□□□□ -1.02
GPN3-207ENST00000550228 C2CD2LO14523 706 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 GABRDO14764 452 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 SYN3O14994 580 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 ATP2C2O75185 946 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 ARHGEF15O94989 841 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 CYP11A1P05108 521 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 CA3P07451 260 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 PAEPP09466 180 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 VDRP11473 427 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 CCDC130P13994 396 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 CHRNB2P17787 502 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 PCSK1P29120 753 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 ADORA2BP29275 332 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 CYLC1P35663 651 aaPredicted RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 PPM1AP35813 382 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 PBX2P40425 430 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 KIF11P52732 1056 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 ARPP19P56211 112 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 CDK17Q00537 523 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 FMO1Q01740 532 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 CDR2Q01850 454 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 YWHAHQ04917 246 aaPredicted RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 MAPK8IP2Q13387 824 aaPredicted RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 GOLGA7BQ2TAP0 167 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 CTXN3Q4LDR2 81 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 SGO2Q562F6 1265 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 MDH1BQ5I0G3 518 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 RTP2Q5QGT7 225 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 ZNF280DQ6N043 979 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 KIAA1841Q6NSI8 718 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 PRSS55Q6UWB4 352 aaPredicted RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 SPRED2Q7Z698 418 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 VPS36Q86VN1 386 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 UNC93AQ86WB7 457 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 PASD1Q8IV76 773 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 THEM5Q8N1Q8 247 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 C12orf29Q8N999 325 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 ACRBPQ8NEB7 543 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 LNX1Q8TBB1 728 aaPredicted RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 RIN2Q8WYP3 895 aaPredicted RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 TMEM209Q96SK2 561 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 RTP3Q9BQQ7 232 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 ZSWIM1Q9BR11 485 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 C17orf80Q9BSJ5 609 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 DESI2Q9BSY9 194 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 MED10Q9BTT4 135 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 TTPALQ9BTX7 342 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 HERC2P3Q9BVR0 1158 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 DNAI2Q9GZS0 605 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 NKX2-4Q9H2Z4 354 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 FAM124BQ9H5Z6 455 aaPredicted RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 PYCARDQ9ULZ3 195 aa8.66□□□□□ -1.02
GPN3-207ENST00000550228 YBX2Q9Y2T7 364 aaKnown RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 BZW2Q9Y6E2 419 aaKnown RBP8.66□□□□□ -1.02
GPN3-207ENST00000550228 A0A087X0T9 212 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 SSU72P8A0A1W2PR75 194 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 CARNS1A5YM72 827 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 TMCO5BA8MYB1 307 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 M0QYV0 167 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 DDX3XO00571 662 aaKnown RBP eCLIP8.65□□□□□ -1.02
GPN3-207ENST00000550228 ARHGAP6O43182 974 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 MED7O43513 233 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 FGF18O76093 207 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 MICAL2O94851 1124 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 SOD2P04179 222 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 CFHP08603 1231 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 FAM163BP0C2L3 166 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 OR4Q2P0C623 313 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 LINC00271P0C7V0 271 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 FAM228BP0C875 321 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 PTPN1P18031 435 aaKnown RBP8.65□□□□□ -1.02
GPN3-207ENST00000550228 FGFR3P22607 806 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 DNAJB2P25686 324 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 BMPR1AP36894 532 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 GLUD2P49448 558 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 TSPY1Q01534 308 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 GFPT1Q06210 699 aaPredicted RBP8.65□□□□□ -1.02
GPN3-207ENST00000550228 PSMD5Q16401 504 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 USP41Q3LFD5 358 aa8.65□□□□□ -1.02
GPN3-207ENST00000550228 INTS6LQ5JSJ4 861 aaKnown RBP8.65□□□□□ -1.02
GPN3-207ENST00000550228 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms