RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 CEP170P1Q96L14 293 aa10.86□□□□□ -0.67
ERBB3-214ENST00000550070 TRIM6Q9C030 488 aaPredicted RBP10.86□□□□□ -0.67
ERBB3-214ENST00000550070 TMEM39BQ9GZU3 492 aa10.86□□□□□ -0.67
ERBB3-214ENST00000550070 IQCGQ9H095 443 aaKnown RBP10.86□□□□□ -0.67
ERBB3-214ENST00000550070 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
ERBB3-214ENST00000550070 APOBEC3GQ9HC16 384 aaKnown RBP10.86□□□□□ -0.67
ERBB3-214ENST00000550070 MRPL47Q9HD33 250 aaKnown RBP10.86□□□□□ -0.67
ERBB3-214ENST00000550070 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
ERBB3-214ENST00000550070 BLOC1S6Q9UL45 172 aa10.86□□□□□ -0.67
ERBB3-214ENST00000550070 ZNF148Q9UQR1 794 aa10.86□□□□□ -0.67
ERBB3-214ENST00000550070 ITM2BQ9Y287 266 aa10.86□□□□□ -0.67
ERBB3-214ENST00000550070 ZNF862O60290 1169 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 ATP5HO75947 161 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 ATF7P17544 494 aaPredicted RBP10.85□□□□□ -0.67
ERBB3-214ENST00000550070 GM2AP17900 193 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 GNAZP19086 355 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 TNNI1P19237 187 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 RPS6P62753 249 aaKnown RBP10.85□□□□□ -0.67
ERBB3-214ENST00000550070 GHRHRQ02643 423 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 GPS1Q13098 491 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 DGKZQ13574 1117 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 ZACNQ401N2 412 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 TMEM270Q6UE05 265 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 MFSD7Q6UXD7 560 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 ALLCQ8N6M5 410 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 FAM13CQ8NE31 585 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 BICD1Q96G01 975 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 SLITRK1Q96PX8 696 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 SMC6Q96SB8 1091 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 MOV10L1Q9BXT6 1211 aaKnown RBP10.85□□□□□ -0.67
ERBB3-214ENST00000550070 MAK16Q9BXY0 300 aaKnown RBP10.85□□□□□ -0.67
ERBB3-214ENST00000550070 VPS37BQ9H9H4 285 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 TELO2Q9Y4R8 837 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 PLSCR1O15162 318 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 TYROBPO43914 113 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 PEX11AO75192 247 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 BANF1O75531 89 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 CA4P22748 312 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 GNA15P30679 374 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 SFNP31947 248 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 PIK3CAP42336 1068 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 SLC18A1P54219 525 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 CLDN10P78369 228 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 LMNB2Q03252 620 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 EAPPQ56P03 285 aaPredicted RBP10.85□□□□□ -0.67
ERBB3-214ENST00000550070 ZNF449Q6P9G9 518 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 PHF13Q86YI8 300 aaPredicted RBP10.85□□□□□ -0.67
ERBB3-214ENST00000550070 AGGF1Q8N302 714 aaeCLIP10.85□□□□□ -0.67
ERBB3-214ENST00000550070 FEZF2Q8TBJ5 459 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 TTC25Q96NG3 672 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 ZMYND8Q9ULU4 1186 aaPredicted RBP10.85□□□□□ -0.67
ERBB3-214ENST00000550070 PCDHB4Q9Y5E5 795 aa10.85□□□□□ -0.67
ERBB3-214ENST00000550070 NFASCO94856 1347 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 TRIM64CA6NLI5 447 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 TPPPO94811 219 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 STBD1O95210 358 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 CBX6O95503 412 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 ACOT2P49753 483 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 NLRP11P59045 1033 aaKnown RBP10.84□□□□□ -0.67
ERBB3-214ENST00000550070 NOP14P78316 857 aaKnown RBP10.84□□□□□ -0.67
ERBB3-214ENST00000550070 KRT76Q01546 638 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 CUL2Q13617 745 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 WDR72Q3MJ13 1102 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 SCARA3Q6AZY7 606 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 CEP128Q6ZU80 1094 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 OTOAQ7RTW8 1153 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 NLRX1Q86UT6 975 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 LONP2Q86WA8 852 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 ZBED8Q8IZ13 594 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 RCOR2Q8IZ40 523 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 ARL10Q8N8L6 244 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 LRRC8CQ8TDW0 803 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 INPP5DQ92835 1189 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 HAUS1Q96CS2 278 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 VCPIP1Q96JH7 1222 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 FNBP1Q96RU3 617 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 TBC1D10AQ9BXI6 508 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 ZNF341Q9BYN7 854 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 RNPEPL1Q9HAU8 725 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 CYLDQ9NQC7 956 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 XPNPEP1Q9NQW7 623 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 SMG5Q9UPR3 1016 aaKnown RBP10.84□□□□□ -0.67
ERBB3-214ENST00000550070 NUMBLQ9Y6R0 609 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 IVNS1ABPQ9Y6Y0 642 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 ALOX15BO15296 676 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 EXTL3O43909 919 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 DCTN3O75935 186 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 SMNDC1O75940 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
ERBB3-214ENST00000550070 TCF3P15923 654 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 CALB2P22676 271 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 EPHB2P29323 1055 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 CHRNA5P30532 468 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 ENPEPQ07075 957 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 ZNF252P-AS1Q0IIN9 211 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 PSMD6Q15008 389 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 TAF11Q15544 211 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 RNASEH2BQ5TBB1 312 aaKnown RBP10.84□□□□□ -0.67
ERBB3-214ENST00000550070 TXNRD3NBQ6F5E7 133 aa10.84□□□□□ -0.67
ERBB3-214ENST00000550070 DRICH1Q6PGQ1 229 aaPredicted RBP10.84□□□□□ -0.67
ERBB3-214ENST00000550070 ACSF2Q96CM8 615 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms