RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TMEM209Q96SK2 561 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 ZCWPW1Q9H0M4 648 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 RPF1Q9H9Y2 349 aaKnown RBP10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 IL21Q9HBE4 155 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 SH2B1Q9NRF2 756 aaPredicted RBP10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 DSEQ9UL01 958 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 TBX20Q9UMR3 447 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 DERAQ9Y315 318 aa10.68□□□□□ -0.7
TRAFD1-207ENST00000550051 MAP1BP46821 2468 aaKnown RBP10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 EML5Q05BV3 1969 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 ZNF638Q14966 1978 aaKnown RBP10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 TRDMT1O14717 391 aaKnown RBP10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 PPEF2O14830 753 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 SLC26A4O43511 780 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 EXTL3O43909 919 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 RPP40O75818 363 aaKnown RBP10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 SOAT2O75908 522 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 PRAMEF12O95522 483 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 PLA2G4BP0C869 781 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 PMLP29590 882 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 HOXC13P31276 330 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 MCM2P49736 904 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 LIG4P49917 911 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 GUCY2FP51841 1108 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 ATP2C1P98194 919 aaPredicted RBP10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 POU5F1Q01860 360 aaKnown RBP10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 RUNX3Q13761 415 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 VEPH1Q14D04 833 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 RILPL1Q5EBL4 403 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 N4BP2L1Q5TBK1 243 aaPredicted RBP10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 CMTM8Q8IZV2 173 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 CAMKK1Q8N5S9 505 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 OR10T2Q8NGX3 314 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 TTC8Q8TAM2 541 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 ARRDC1-AS1Q9H2J1 176 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 OCEL1Q9H607 264 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 CPSF3Q9UKF6 684 aaKnown RBP10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 ANGPTL2Q9UKU9 493 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 ODF2LQ9ULJ1 636 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 PCDHGA5Q9Y5G8 931 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 ATG2BQ96BY7 2078 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 SCN1AP35498 2009 aa10.67□□□□□ -0.7
TRAFD1-207ENST00000550051 SDK1Q7Z5N4 2213 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 NPHP3-ACAD11A0A0J9YXS1 232 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 EPN2O95208 641 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 SEC24BO95487 1268 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 F11P03951 625 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 HAPLN1P10915 354 aaPredicted RBP10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 ATF6P18850 670 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 DDX6P26196 483 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 ABCD1P33897 745 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 AMPD2Q01433 879 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 GRSF1Q12849 480 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 SF3A2Q15428 464 aaKnown RBP10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 STPG1Q5TH74 334 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 ARL6IP4Q66PJ3 421 aaKnown RBP10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 JADE1Q6IE81 842 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 FSTL4Q6MZW2 842 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 TMEM150AQ86TG1 271 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 LRRTM3Q86VH5 581 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 THEM5Q8N1Q8 247 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 C12orf50Q8NA57 414 aaPredicted RBP10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 SPPL2BQ8TCT7 592 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 CHFRQ96EP1 664 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 BICD1Q96G01 975 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 LPIN3Q9BQK8 851 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 CCSER1Q9C0I3 900 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 ASB7Q9H672 318 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 HPS4Q9NQG7 708 aa10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 CNOT1A5YKK6 2376 aaKnown RBP10.66□□□□□ -0.7
TRAFD1-207ENST00000550051 OTOL1A6NHN0 477 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 CYB561D2O14569 222 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 HNRNPDLO14979 420 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 HMGA1P17096 107 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 DRD1P21728 446 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 ZNF131P52739 623 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 NLRP12P59046 1061 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 CYP4F8P98187 520 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 GTF2BQ00403 316 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 ZRSR1Q15695 479 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 MGAT5BQ3V5L5 792 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 AASDHQ4L235 1098 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 TMEM119Q4V9L6 283 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 SLC39A12Q504Y0 691 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 SLC39A4Q6P5W5 647 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 PKN3Q6P5Z2 889 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 KBTBD6Q86V97 674 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 METTL23Q86XA0 190 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 USP13Q92995 863 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 AK8Q96MA6 479 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 GCNAQ96QF7 691 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 PLIN2Q99541 437 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 SEPT5Q99719 369 aaPredicted RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 LSM14BQ9BX40 385 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 KIF9Q9HAQ2 790 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 FBRSL1Q9HCM7 1045 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 RXFP3Q9NSD7 469 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 TDP1Q9NUW8 608 aa10.65□□□□□ -0.7
TRAFD1-207ENST00000550051 SLC8A2Q9UPR5 921 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms