RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.66■□□□□ 0.26
RAB5C-205ENST00000550013 CYB561D2O14569 222 aa16.66■□□□□ 0.26
RAB5C-205ENST00000550013 TBCAO75347 108 aaKnown RBP16.66■□□□□ 0.26
RAB5C-205ENST00000550013 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
RAB5C-205ENST00000550013 PAX3P23760 479 aa16.66■□□□□ 0.26
RAB5C-205ENST00000550013 TUFMP49411 452 aaKnown RBP16.66■□□□□ 0.26
RAB5C-205ENST00000550013 GTF2BQ00403 316 aa16.66■□□□□ 0.26
RAB5C-205ENST00000550013 CCINQ13939 588 aa16.66■□□□□ 0.26
RAB5C-205ENST00000550013 VEPH1Q14D04 833 aa16.66■□□□□ 0.26
RAB5C-205ENST00000550013 WSCD1Q658N2 575 aa16.66■□□□□ 0.26
RAB5C-205ENST00000550013 ADALQ6DHV7 355 aa16.66■□□□□ 0.26
RAB5C-205ENST00000550013 SLC46A2Q9BY10 475 aa16.66■□□□□ 0.26
RAB5C-205ENST00000550013 CNOT1A5YKK6 2376 aaKnown RBP16.65■□□□□ 0.26
RAB5C-205ENST00000550013 LRP3O75074 770 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 HAPLN1P10915 354 aaPredicted RBP16.65■□□□□ 0.26
RAB5C-205ENST00000550013 WEE1P30291 646 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 CDC25CP30307 473 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 MCM2P49736 904 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 TAF6P49848 677 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 ITPRIPL2Q3MIP1 535 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 PKN3Q6P5Z2 889 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 PRR23CQ6ZRP0 262 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 METTL23Q86XA0 190 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 EFCAB13Q8IY85 973 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 STKLD1Q8NE28 680 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 RASSF8Q8NHQ8 419 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 NETO1Q8TDF5 533 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 GCNAQ96QF7 691 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 ASB7Q9H672 318 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 DPP3Q9NY33 737 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 ABI2Q9NYB9 513 aaPredicted RBP16.65■□□□□ 0.26
RAB5C-205ENST00000550013 AGO2Q9UKV8 859 aaKnown RBP16.65■□□□□ 0.26
RAB5C-205ENST00000550013 DSEQ9UL01 958 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 C2CD2Q9Y426 696 aa16.65■□□□□ 0.26
RAB5C-205ENST00000550013 MAP1BP46821 2468 aaKnown RBP16.65■□□□□ 0.26
RAB5C-205ENST00000550013 SLC30A4O14863 429 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 EXTL3O43909 919 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 GDF9O60383 454 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 CNR2P34972 360 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 PLCB2Q00722 1185 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 TAF12Q16514 161 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 CSRP2Q16527 193 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 CRELD2Q6UXH1 353 aaPredicted RBP16.64■□□□□ 0.25
RAB5C-205ENST00000550013 CEP68Q76N32 757 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 TMEM150AQ86TG1 271 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 WDR5BQ86VZ2 330 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 THEM5Q8N1Q8 247 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 FAM160A2Q8N612 972 aaPredicted RBP16.64■□□□□ 0.25
RAB5C-205ENST00000550013 GKN1Q9NS71 199 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 CCL26Q9Y258 94 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 STYXL1Q9Y6J8 313 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 GREB1Q4ZG55 1949 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 EML5Q05BV3 1969 aa16.64■□□□□ 0.25
RAB5C-205ENST00000550013 LONP1P36776 959 aaKnown RBP16.63■□□□□ 0.25
RAB5C-205ENST00000550013 PXNP49023 591 aaPredicted RBP16.63■□□□□ 0.25
RAB5C-205ENST00000550013 GPR15P49685 360 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 PPM1JQ5JR12 505 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 TRIM68Q6AZZ1 485 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 SLFN12LQ6IEE8 588 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 SFR1Q86XK3 245 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 SYNPOQ8N3V7 929 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 MAB21L3Q8N8X9 362 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 SPPL2BQ8TCT7 592 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 C2orf15Q8WU43 125 aaKnown RBP16.63■□□□□ 0.25
RAB5C-205ENST00000550013 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
RAB5C-205ENST00000550013 CHFRQ96EP1 664 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 CCSER1Q9C0I3 900 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 HPS4Q9NQG7 708 aa16.63■□□□□ 0.25
RAB5C-205ENST00000550013 THG1LQ9NWX6 298 aaKnown RBP16.63■□□□□ 0.25
RAB5C-205ENST00000550013 OTOL1A6NHN0 477 aaPredicted RBP16.62■□□□□ 0.25
RAB5C-205ENST00000550013 KPNA7A9QM74 516 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 KRT37O76014 449 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 ADRB1P08588 477 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 HMGA1P17096 107 aaKnown RBP16.62■□□□□ 0.25
RAB5C-205ENST00000550013 ADSSP30520 456 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 HOXA6P31267 233 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 ABCD1P33897 745 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 WNT7BP56706 349 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 NLRP12P59046 1061 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 SF3A1Q15459 793 aaKnown RBP16.62■□□□□ 0.25
RAB5C-205ENST00000550013 SDHAF4Q5VUM1 108 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 FSTL4Q6MZW2 842 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 DYMQ7RTS9 669 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 ZSWIM2Q8NEG5 633 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 RIN3Q8TB24 985 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 USP13Q92995 863 aaPredicted RBP16.62■□□□□ 0.25
RAB5C-205ENST00000550013 FAM84AQ96KN4 292 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 FAM83CQ9BQN1 747 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 ST6GALNAC4Q9H4F1 302 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 EBF3Q9H4W6 596 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 PCDHB5Q9Y5E4 795 aa16.62■□□□□ 0.25
RAB5C-205ENST00000550013 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
RAB5C-205ENST00000550013 F11P03951 625 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 ARSAP15289 507 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 DDIT3P35638 169 aa16.61■□□□□ 0.25
RAB5C-205ENST00000550013 AVPR1AP37288 418 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms