RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 FER1L4A9Z1Z3 1794 aa5.26□□□□□ -1.57
CCDC38-206ENST00000548771 MANSC4A6NHS7 340 aaPredicted RBP5.25□□□□□ -1.57
CCDC38-206ENST00000548771 URI1O94763 535 aaPredicted RBP5.25□□□□□ -1.57
CCDC38-206ENST00000548771 NR2F6P10588 404 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 TYRP14679 529 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 SMARCA1P28370 1054 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 PHKA1P46020 1223 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 MAP2K6P52564 334 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 BMPR2Q13873 1038 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 THEMIS2Q5TEJ8 643 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 VPS53Q5VIR6 699 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 HEATR3Q7Z4Q2 680 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 AMIGO2Q86SJ2 522 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 PPP1R3BQ86XI6 285 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 RASAL3Q86YV0 1011 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 CPA6Q8N4T0 437 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 FAM136AQ96C01 138 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 TPSD1Q9BZJ3 242 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 TCF7L1Q9HCS4 588 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 PCDH12Q9NPG4 1184 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 FLRT1Q9NZU1 646 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 SERGEFQ9UGK8 458 aa5.25□□□□□ -1.57
CCDC38-206ENST00000548771 TTLL1O95922 423 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 ZFXP17010 805 aaPredicted RBP5.24□□□□□ -1.57
CCDC38-206ENST00000548771 DRD4P21917 467 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 ABCG1P45844 678 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 NKX6-1P78426 367 aaPredicted RBP5.24□□□□□ -1.57
CCDC38-206ENST00000548771 RBM20Q5T481 1227 aaKnown RBP5.24□□□□□ -1.57
CCDC38-206ENST00000548771 EMC10Q5UCC4 262 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 KIAA1614Q5VZ46 1190 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 DTX2Q86UW9 622 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 DDX17Q92841 729 aaKnown RBP5.24□□□□□ -1.57
CCDC38-206ENST00000548771 REPS1Q96D71 796 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 NELL2Q99435 816 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 ACTRT3Q9BYD9 372 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 SIK2Q9H0K1 926 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 ABCF2Q9UG63 623 aa5.24□□□□□ -1.57
CCDC38-206ENST00000548771 LINC01548A6NM66 108 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 ZNF213O14771 459 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 DNAJB5O75953 348 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 CCND1P24385 295 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 GCLCP48506 637 aaPredicted RBP5.23□□□□□ -1.57
CCDC38-206ENST00000548771 CCT8P50990 548 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 KRTAP5-11Q6L8G4 156 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 SCARB1Q8WTV0 552 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 FKBP10Q96AY3 582 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 RGMAQ96B86 450 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 ZNF778Q96MU6 729 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 RAD54BQ9Y620 910 aa5.23□□□□□ -1.57
CCDC38-206ENST00000548771 DCLK1O15075 740 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 VPS4BO75351 444 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 ITGALP20701 1170 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
CCDC38-206ENST00000548771 TBCCQ15814 346 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 ZNF425Q6IV72 752 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 ZNF551Q7Z340 670 aaPredicted RBP5.22□□□□□ -1.57
CCDC38-206ENST00000548771 KLHDC4Q8TBB5 520 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 DDB2Q92466 427 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 FAM167AQ96KS9 214 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 GTPBP4Q9BZE4 634 aaKnown RBP5.22□□□□□ -1.57
CCDC38-206ENST00000548771 SLAMF7Q9NQ25 335 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.22□□□□□ -1.57
CCDC38-206ENST00000548771 PNPOQ9NVS9 261 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 RNF7Q9UBF6 113 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 HESX1Q9UBX0 185 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 NR2E3Q9Y5X4 410 aa5.22□□□□□ -1.57
CCDC38-206ENST00000548771 TARM1B6A8C7 271 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 AHSGP02765 367 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 FTLP02792 175 aaPredicted RBP5.21□□□□□ -1.58
CCDC38-206ENST00000548771 CHRM3P20309 590 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 AKAP5P24588 427 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 CD6P30203 668 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 ZNF134P52741 427 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 PROSER3Q2NL68 480 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 FAM153CQ494X1 144 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 BRDTQ58F21 947 aaPredicted RBP5.21□□□□□ -1.58
CCDC38-206ENST00000548771 PLAC9Q5JTB6 97 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 FAM160B1Q5W0V3 765 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 ZNF782Q6ZMW2 699 aaPredicted RBP5.21□□□□□ -1.58
CCDC38-206ENST00000548771 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.21□□□□□ -1.58
CCDC38-206ENST00000548771 CAMKK1Q8N5S9 505 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 TNPO1Q92973 898 aaKnown RBP5.21□□□□□ -1.58
CCDC38-206ENST00000548771 LMBRD1Q9NUN5 540 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 ZNF70Q9UC06 446 aaPredicted RBP5.21□□□□□ -1.58
CCDC38-206ENST00000548771 FEZ2Q9UHY8 353 aaPredicted RBP5.21□□□□□ -1.58
CCDC38-206ENST00000548771 PADI4Q9UM07 663 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 SSX2IPQ9Y2D8 614 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 COL4A3BPQ9Y5P4 624 aa5.21□□□□□ -1.58
CCDC38-206ENST00000548771 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 PPM1DO15297 605 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 DTNBO60941 627 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 SNUPNO95149 360 aaKnown RBP5.2□□□□□ -1.58
CCDC38-206ENST00000548771 HNRNPCP07910 306 aaKnown RBP eCLIP5.2□□□□□ -1.58
CCDC38-206ENST00000548771 PDHA1P08559 390 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 FAM163BP0C2L3 166 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 PIM1P11309 404 aaPredicted RBP5.2□□□□□ -1.58
CCDC38-206ENST00000548771 HDCP19113 662 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 EXOSC10Q01780 885 aaKnown RBP5.2□□□□□ -1.58
CCDC38-206ENST00000548771 SP2Q02086 613 aa5.2□□□□□ -1.58
CCDC38-206ENST00000548771 PLS1Q14651 629 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms