RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 TRPV4Q9HBA0 871 aa12.25□□□□□ -0.45
BEST3-209ENST00000548658 TRPV5Q9NQA5 729 aa12.25□□□□□ -0.45
BEST3-209ENST00000548658 AGPAT3Q9NRZ7 376 aa12.25□□□□□ -0.45
BEST3-209ENST00000548658 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
BEST3-209ENST00000548658 MRPS17Q9Y2R5 130 aaKnown RBP12.25□□□□□ -0.45
BEST3-209ENST00000548658 PCDHB5Q9Y5E4 795 aa12.25□□□□□ -0.45
BEST3-209ENST00000548658 SNX9Q9Y5X1 595 aa12.25□□□□□ -0.45
BEST3-209ENST00000548658 KANSL1LA0AUZ9 987 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 TGFB1I1O43294 461 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 GABBR2O75899 941 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 TNNI1P19237 187 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 PCSK1P29120 753 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 MAGEA9P43362 315 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 BFSP1Q12934 665 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 CUL4BQ13620 913 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 GSE1Q14687 1217 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 TEAD2Q15562 447 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 CBWD2Q8IUF1 395 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 C12orf56Q8IXR9 622 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 PDCL2Q8N4E4 241 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 GLIS3Q8NEA6 775 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 CXorf38Q8TB03 319 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 ZSCAN18Q8TBC5 510 aaPredicted RBP12.24□□□□□ -0.45
BEST3-209ENST00000548658 LEO1Q8WVC0 666 aaPredicted RBP12.24□□□□□ -0.45
BEST3-209ENST00000548658 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 CCDC47Q96A33 483 aaKnown RBP12.24□□□□□ -0.45
BEST3-209ENST00000548658 PAGE5Q96GU1 130 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 HPDLQ96IR7 371 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 GCNAQ96QF7 691 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 TMEM209Q96SK2 561 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 DDX23Q9BUQ8 820 aaKnown RBP12.24□□□□□ -0.45
BEST3-209ENST00000548658 LRRC3Q9BY71 257 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 MTMR12Q9C0I1 747 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 DNAJC25Q9H1X3 360 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 CRISPLD1Q9H336 500 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 BRD9Q9H8M2 597 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 ABCB6Q9NP58 842 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
BEST3-209ENST00000548658 DDX43Q9NXZ2 648 aaKnown RBP12.24□□□□□ -0.45
BEST3-209ENST00000548658 A0A1W2PRU2 124 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 SOBPA7XYQ1 873 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 PROB1E7EW31 1015 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 MAN2B1O00754 1011 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 MOSPD3O75425 235 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 KIF20AO95235 890 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 FAM163BP0C2L3 166 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 HAPLN1P10915 354 aaPredicted RBP12.23□□□□□ -0.45
BEST3-209ENST00000548658 CDC25CP30307 473 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 WNT7BP56706 349 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 RPL10AP62906 217 aaKnown RBP12.23□□□□□ -0.45
BEST3-209ENST00000548658 BECN1Q14457 450 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 C1orf228Q6PIY5 440 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 ZNF852Q6ZMS4 543 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 LRRTM3Q86VH5 581 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 TMC8Q8IU68 726 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 MFSD6LQ8IWD5 586 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 NELFCDQ8IXH7 590 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 RDH13Q8NBN7 331 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 PJA1Q8NG27 643 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 SHKBP1Q8TBC3 707 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 TMEM174Q8WUU8 243 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 ZSWIM3Q96MP5 696 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 BCO2Q9BYV7 579 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 PLA2G2FQ9BZM2 168 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 ATXN3LQ9H3M9 355 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 EXOC1Q9NV70 894 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 ABI2Q9NYB9 513 aaPredicted RBP12.23□□□□□ -0.45
BEST3-209ENST00000548658 SERTAD1Q9UHV2 236 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 SIX4Q9UIU6 781 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 TCHHQ07283 1943 aa12.23□□□□□ -0.45
BEST3-209ENST00000548658 CACNA1HO95180 2353 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.22□□□□□ -0.45
BEST3-209ENST00000548658 A0A1B0GVL5 298 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 DPYSL4O14531 572 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 GABRDO14764 452 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 ZNF263O14978 683 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 CLIC2O15247 247 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 ACTN4O43707 911 aaKnown RBP12.22□□□□□ -0.45
BEST3-209ENST00000548658 EXOC3O60645 756 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 DLATP10515 647 aaKnown RBP12.22□□□□□ -0.45
BEST3-209ENST00000548658 GLULP15104 373 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 PFKFB1P16118 471 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 GJA1P17302 382 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 FCARP24071 287 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 GABRR2P28476 465 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 WEE1P30291 646 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 NBL1P41271 181 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 SYKP43405 635 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 CYP2J2P51589 502 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 AP3M2P53677 418 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 MLLT6P55198 1093 aaPredicted RBP12.22□□□□□ -0.45
BEST3-209ENST00000548658 PSMD6Q15008 389 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 ANGPT1Q15389 498 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 MAPRE1Q15691 268 aaKnown RBP12.22□□□□□ -0.45
BEST3-209ENST00000548658 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
BEST3-209ENST00000548658 GAREM2Q75VX8 874 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 TRAPPC11Q7Z392 1133 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 YAF2Q8IY57 180 aa12.22□□□□□ -0.45
BEST3-209ENST00000548658 ADGRF2Q8IZF7 708 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms