RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 KIAA0895Q8NCT3 520 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 ST13P5Q8NFI4 369 aaPredicted RBP10.23□□□□□ -0.77
USP15-208ENST00000548524 OR10T2Q8NGX3 314 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 RSAD2Q8WXG1 361 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 ING5Q8WYH8 240 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 FGF13Q92913 245 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 CCDC127Q96BQ5 260 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 ASIC4Q96FT7 647 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 FAM84AQ96KN4 292 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 ZCWPW1Q9H0M4 648 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 MFSD1Q9H3U5 465 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 DUSP12Q9UNI6 340 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 SLC27A5Q9Y2P5 690 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 SNX9Q9Y5X1 595 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 MYH11P35749 1972 aa10.23□□□□□ -0.77
USP15-208ENST00000548524 MTMR11A4FU01 709 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 CALUO43852 315 aaPredicted RBP10.22□□□□□ -0.77
USP15-208ENST00000548524 MYL4P12829 197 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 MYL7Q01449 175 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 TSPY1Q01534 308 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 HTR4Q13639 388 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 PSMD6Q15008 389 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 MGAT5BQ3V5L5 792 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 SWT1Q5T5J6 900 aaKnown RBP10.22□□□□□ -0.77
USP15-208ENST00000548524 CENPPQ6IPU0 288 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 PARM1Q6UWI2 310 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 TRAPPC11Q7Z392 1133 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 NPAS3Q8IXF0 933 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 C12orf56Q8IXR9 622 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 PDCL2Q8N4E4 241 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 SLC44A3Q8N4M1 653 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 OR5B17Q8NGF7 314 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 FAM200AQ8TCP9 573 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 MCRS1Q96EZ8 462 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 HPDLQ96IR7 371 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 CGRRF1Q99675 332 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 SEPT5Q99719 369 aaPredicted RBP10.22□□□□□ -0.77
USP15-208ENST00000548524 AVENQ9NQS1 362 aaPredicted RBP10.22□□□□□ -0.77
USP15-208ENST00000548524 ASAH2Q9NR71 780 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 GDE1Q9NZC3 331 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 SIX4Q9UIU6 781 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 L1RE1Q9UN81 338 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 NUMBLQ9Y6R0 609 aa10.22□□□□□ -0.77
USP15-208ENST00000548524 ANHXE9PGG2 379 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 NARSO43776 548 aaKnown RBP10.21□□□□□ -0.77
USP15-208ENST00000548524 PHACTR2O75167 634 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 RHOBTB3O94955 611 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 CLSTN1O94985 981 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 PDGFBP01127 241 aaPredicted RBP10.21□□□□□ -0.77
USP15-208ENST00000548524 CFHP08603 1231 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 SRFP11831 508 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 CEBPBP17676 345 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 RFX1P22670 979 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 CLCN1P35523 988 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 TUFMP49411 452 aaKnown RBP10.21□□□□□ -0.77
USP15-208ENST00000548524 CDR1P51861 262 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 SMARCB1Q12824 385 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 DPYDQ12882 1025 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 TRPC3Q13507 836 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 VEPH1Q14D04 833 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 SLC5A9Q2M3M2 681 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 ADGRF2Q8IZF7 708 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 TMEM86AQ8N2M4 240 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 TOP6BLQ8N6T0 577 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 LEMD2Q8NC56 503 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 SPPL2BQ8TCT7 592 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 C2orf15Q8WU43 125 aaKnown RBP10.21□□□□□ -0.77
USP15-208ENST00000548524 TCEAL4Q96EI5 215 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 RTP3Q9BQQ7 232 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 REPIN1Q9BWE0 567 aaKnown RBP10.21□□□□□ -0.77
USP15-208ENST00000548524 CRISPLD1Q9H336 500 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 GDAP2Q9NXN4 497 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 DDX43Q9NXZ2 648 aaKnown RBP10.21□□□□□ -0.77
USP15-208ENST00000548524 ABI2Q9NYB9 513 aaPredicted RBP10.21□□□□□ -0.77
USP15-208ENST00000548524 CEP72Q9P209 647 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 ASB3Q9Y575 518 aa10.21□□□□□ -0.77
USP15-208ENST00000548524 PTPRJQ12913 1337 aa10.21□□□□□ -0.78
USP15-208ENST00000548524 PLXNA3P51805 1871 aa10.21□□□□□ -0.78
USP15-208ENST00000548524 MYH15Q9Y2K3 1946 aa10.21□□□□□ -0.78
USP15-208ENST00000548524 PDXKO00764 312 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 SOAT2O75908 522 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 MICAL2O94851 1124 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 VNN2O95498 520 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 NR3C1P04150 777 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 ACAT1P24752 427 aaKnown RBP10.2□□□□□ -0.78
USP15-208ENST00000548524 PCSK1P29120 753 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 LHX1P48742 406 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 BIRC3Q13489 604 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 KCNB1Q14721 858 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 TAF12Q16514 161 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 NFE2Q16621 373 aaPredicted RBP10.2□□□□□ -0.78
USP15-208ENST00000548524 PRSS36Q5K4E3 855 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 CEP135Q66GS9 1140 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 SCARA3Q6AZY7 606 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 ITIH5Q86UX2 942 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 LRRTM3Q86VH5 581 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 SLC9A9Q8IVB4 645 aa10.2□□□□□ -0.78
USP15-208ENST00000548524 TTC9BQ8N6N2 239 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms